RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MYBPHQ13203 477 aa12.52□□□□□ -0.41
MSH5-206ENST00000423982 LYZL2Q7Z4W2 148 aa12.52□□□□□ -0.41
MSH5-206ENST00000423982 APCDD1LQ8NCL9 501 aa12.52□□□□□ -0.41
MSH5-206ENST00000423982 NAXEQ8NCW5 288 aa12.52□□□□□ -0.41
MSH5-206ENST00000423982 TMEM234Q8WY98 164 aa12.52□□□□□ -0.41
MSH5-206ENST00000423982 JSRP1Q96MG2 331 aaPredicted RBP12.52□□□□□ -0.41
MSH5-206ENST00000423982 B3GALT1Q9Y5Z6 326 aa12.52□□□□□ -0.41
MSH5-206ENST00000423982 PUS1Q9Y606 427 aaKnown RBP eCLIP12.52□□□□□ -0.41
MSH5-206ENST00000423982 ITGA3P26006 1051 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 NUBP1P53384 320 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 FAM3AP98173 230 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 UBE2V2Q15819 145 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 NKAIN1Q4KMZ8 207 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 RHBDD2Q6NTF9 364 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 PLXDC2Q6UX71 529 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 C20orf196Q8IYI0 205 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 FAM89BQ8N5H3 189 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 TAAR9Q96RI9 348 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
MSH5-206ENST00000423982 LOXL2Q9Y4K0 774 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 FAM221AA4D161 298 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 ZNF727A8MUV8 499 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 ATXN7O15265 892 aaPredicted RBP12.51□□□□□ -0.41
MSH5-206ENST00000423982 GPR37O15354 613 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 GAPDHP04406 335 aaKnown RBP12.51□□□□□ -0.41
MSH5-206ENST00000423982 DANCRP0C864 163 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 RNF4P78317 190 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 RPUSD3Q6P087 351 aaKnown RBP12.51□□□□□ -0.41
MSH5-206ENST00000423982 OPN5Q6U736 354 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 ASCL5Q7RTU5 278 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 SGPP2Q8IWX5 399 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 ZNF565Q8N9K5 539 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 UBAC2Q8NBM4 344 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 OR14K1Q8NGZ2 314 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 C19orf12Q9NSK7 152 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 MMP24Q9Y5R2 645 aa12.51□□□□□ -0.41
MSH5-206ENST00000423982 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 F5H5K5 113 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 AP4M1O00189 453 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 PGA4P0DJD7 388 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 PGA3P0DJD8 388 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 FCGR2AP12318 317 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 EIF2S3P41091 472 aaKnown RBP12.5□□□□□ -0.41
MSH5-206ENST00000423982 CEBPGP53567 150 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 FXYD4P59646 89 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 HES3Q5TGS1 186 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 OR52M1Q8NGK5 317 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 STT3BQ8TCJ2 826 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 ABHD14AQ9BUJ0 271 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 KLHL13Q9P2N7 655 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 TUBD1Q9UJT1 453 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 POMT1Q9Y6A1 747 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 ANKUB1A6NFN9 424 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 IFITM10A6NMD0 228 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 OR5AC1P0C628 307 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 JMJD7P0C870 316 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 TMEM225BP0DP42 221 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 PIGPP57054 158 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 CCL20P78556 96 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 PHLDA2Q53GA4 152 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
MSH5-206ENST00000423982 WDR77Q9BQA1 342 aaPredicted RBP12.5□□□□□ -0.41
MSH5-206ENST00000423982 GGACTQ9BVM4 153 aa12.5□□□□□ -0.41
MSH5-206ENST00000423982 NXT1Q9UKK6 140 aaKnown RBP12.5□□□□□ -0.41
MSH5-206ENST00000423982 COL5A1P20908 1838 aaPredicted RBP12.49□□□□□ -0.41
MSH5-206ENST00000423982 CRYM-AS1A6NIL9 109 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 ANGPTL7O43827 346 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 S100PP25815 95 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 RPS23P62266 143 aaKnown RBP12.49□□□□□ -0.41
MSH5-206ENST00000423982 UEVLDQ8IX04 471 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 NOXO1Q8NFA2 376 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 DDIT4LQ96D03 193 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 FAAP24Q9BTP7 215 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 PADI1Q9ULC6 663 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 CEP295Q9C0D2 2601 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 VSTM2BA6NLU5 285 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 IFNA21P01568 189 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 QDPRP09417 244 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 SFTPDP35247 375 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 NBL1P41271 181 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 THEM4Q5T1C6 240 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 ZNF343Q6P1L6 599 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 FAM213BQ8TBF2 198 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 MR1Q95460 341 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 MVB12AQ96EY5 273 aa12.49□□□□□ -0.41
MSH5-206ENST00000423982 PAPOLGQ9BWT3 736 aaKnown RBP12.49□□□□□ -0.41
MSH5-206ENST00000423982 A0A1W2PNU3 283 aaPredicted RBP12.48□□□□□ -0.41
MSH5-206ENST00000423982 LY86O95711 162 aa12.48□□□□□ -0.41
MSH5-206ENST00000423982 APOBEC1P41238 236 aaKnown RBP12.48□□□□□ -0.41
MSH5-206ENST00000423982 ZNF84P51523 738 aa12.48□□□□□ -0.41
MSH5-206ENST00000423982 SLC35A1P78382 337 aa12.48□□□□□ -0.41
MSH5-206ENST00000423982 CHAF1BQ13112 559 aa12.48□□□□□ -0.41
MSH5-206ENST00000423982 CLINT1Q14677 625 aa12.48□□□□□ -0.41
MSH5-206ENST00000423982 ZNF600Q6ZNG1 722 aa12.48□□□□□ -0.41
MSH5-206ENST00000423982 SGK3Q96BR1 496 aa12.48□□□□□ -0.41
MSH5-206ENST00000423982 MARS2Q96GW9 593 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms