RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 DYNAPQ8N1N2 210 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 C11orf44Q8N8P7 122 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 OR4C13Q8NGP0 309 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 OR8J1Q8NGP2 316 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 PYDC1Q8WXC3 89 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 EMG1Q92979 244 aaKnown RBP12.61□□□□□ -0.39
ACTB-202ENST00000414620 BORCS8Q96FH0 119 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 CENPNQ96H22 339 aaPredicted RBP12.61□□□□□ -0.39
ACTB-202ENST00000414620 NKX3-1Q99801 234 aaPredicted RBP12.61□□□□□ -0.39
ACTB-202ENST00000414620 OSBPL10Q9BXB5 764 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 CHST5Q9GZS9 411 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 FBLN5Q9UBX5 448 aa12.61□□□□□ -0.39
ACTB-202ENST00000414620 ZNF737O75373 536 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 SULT1C4O75897 302 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 ATP5HO75947 161 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 CHRM2P08172 466 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 CALCBP10092 127 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 POU3F4P49335 361 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 FUT6P51993 359 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 CNN3Q15417 329 aaKnown RBP12.6□□□□□ -0.39
ACTB-202ENST00000414620 C2orf68Q2NKX9 166 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 GDPD3Q7L5L3 318 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 TCF23Q7RTU1 214 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 TPRX1Q8N7U7 411 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 CHST6Q9GZX3 395 aa12.6□□□□□ -0.39
ACTB-202ENST00000414620 KIAA2026Q5HYC2 2103 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 C17orf98A8MV24 154 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 IGHA1P01876 353 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 CSF1P09603 554 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 UBCP0CG48 685 aaKnown RBP12.59□□□□□ -0.39
ACTB-202ENST00000414620 BCL3P20749 454 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 DUSP1P28562 367 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 RAB13P51153 203 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 EFNB2P52799 333 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 CDC42P60953 191 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 HERPUD1Q15011 391 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 FAM189A2Q15884 450 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 CRIP3Q6Q6R5 217 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 KLHDC1Q8N7A1 406 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 RFKQ969G6 155 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 RFT1Q96AA3 541 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 ADAT3Q96EY9 351 aaPredicted RBP12.59□□□□□ -0.39
ACTB-202ENST00000414620 RBFOX1Q9NWB1 397 aaKnown RBP12.59□□□□□ -0.39
ACTB-202ENST00000414620 IMPAD1Q9NX62 359 aa12.59□□□□□ -0.39
ACTB-202ENST00000414620 PLXNB1O43157 2135 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 MEGF11A6BM72 1044 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 ENTPD6O75354 484 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 HAND1O96004 215 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 SERPINA3P01011 423 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 ZNF728P0DKX0 622 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 VSIG10L2P0DP72 767 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 NPBWR2P48146 333 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 ISL1P61371 349 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 DYNC1I2Q13409 638 aaKnown RBP12.58□□□□□ -0.4
ACTB-202ENST00000414620 TMED1Q13445 227 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 ZIK1Q3SY52 487 aaPredicted RBP12.58□□□□□ -0.4
ACTB-202ENST00000414620 LDLRAD2Q5SZI1 272 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 Q6ZTK2 550 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 TMEM219Q86XT9 240 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 OR8H2Q8N162 312 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 OR13D1Q8NGV5 346 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 PIFOQ8TCI5 191 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 RNF166Q96A37 237 aaPredicted RBP12.58□□□□□ -0.4
ACTB-202ENST00000414620 RNFT2Q96EX2 444 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 ZNF714Q96N38 554 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 RAB18Q9NP72 206 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 AASSQ9UDR5 926 aa12.58□□□□□ -0.4
ACTB-202ENST00000414620 IGKV1-9A0A0C4DH69 117 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 ODF3BA8MYP8 253 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 EI24O14681 340 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 IGHV1-8P0DP01 117 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 ZNF20P17024 532 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 JUNBP17275 347 aaPredicted RBP12.57□□□□□ -0.4
ACTB-202ENST00000414620 GABRR1P24046 479 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 AZGP1P25311 298 aaKnown RBP12.57□□□□□ -0.4
ACTB-202ENST00000414620 KIR2DS4P43632 304 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 ATP1B3P54709 279 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 OR12D2P58182 307 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 ZNF91Q05481 1191 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 HABP2Q14520 560 aaPredicted RBP12.57□□□□□ -0.4
ACTB-202ENST00000414620 GRK1Q15835 563 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 SSX2Q16385 188 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 AANATQ16613 207 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 CCDC54Q8NEL0 328 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 OR52N4Q8NGI2 321 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 OR2G2Q8NGZ5 317 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 FGGYQ96C11 551 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 SNX22Q96L94 193 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 NPFFR1Q9GZQ6 430 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
ACTB-202ENST00000414620 ABCB10Q9NRK6 738 aa12.57□□□□□ -0.4
ACTB-202ENST00000414620 DAPL1A0PJW8 107 aa12.56□□□□□ -0.4
ACTB-202ENST00000414620 FAM90A8PA6NJQ4 464 aa12.56□□□□□ -0.4
ACTB-202ENST00000414620 SIRPB1O00241 398 aa12.56□□□□□ -0.4
ACTB-202ENST00000414620 PSPNO60542 156 aa12.56□□□□□ -0.4
ACTB-202ENST00000414620 PRKACAP17612 351 aa12.56□□□□□ -0.4
ACTB-202ENST00000414620 ATF1P18846 271 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms