RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ERICH5Q6P6B1 374 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 UNQ9165/PRO28630Q6UXU0 137 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 FAM231DQ6ZW35 169 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 LINC00337Q8N6G1 96 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 OR4K17Q8NGC6 315 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 ANGPTL6Q8NI99 470 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 WDR34Q96EX3 536 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 OR2A7Q96R45 310 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 ZNF649Q9BS31 505 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 MED10Q9BTT4 135 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 OR52A5Q9H2C5 316 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 SND1-IT1Q9HBX3 110 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 MS4A12Q9NXJ0 267 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 KLF13Q9Y2Y9 288 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 MIA3Q5JRA6 1907 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 DYSFO75923 2080 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 LOC389332A0A1B0GUA5 103 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 OR2AT4A6NND4 320 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 CEACAM18A8MTB9 384 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 SULT1C2O00338 296 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 NDUFS6O75380 124 aaKnown RBP2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 SNAP29O95721 258 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 CDK1P06493 297 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 RPA3P35244 121 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 AQP5P55064 265 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 ATP5G2Q06055 141 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 ZNF616Q08AN1 781 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 TRDNQ13061 729 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 PMS2P3Q13401 168 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 EIF4EBP2Q13542 120 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 MOBPQ13875 183 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 OR4D1Q15615 310 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 COMTD1Q86VU5 262 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 IQCF2Q8IXL9 164 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 OSR2Q8N2R0 312 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 RNF10Q8N5U6 811 aaKnown RBP2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 FAM57AQ8TBR7 257 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 FMC1Q96HJ9 113 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 IP6K3Q96PC2 410 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 APOL4Q9BPW4 351 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 PARP11Q9NR21 331 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 DIABLOQ9NR28 239 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 NRBP2Q9NSY0 501 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 RWDD2AQ9UIY3 292 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 YEATS2Q9ULM3 1422 aa2.82□□□□□ -1.96
HMGB3P31-201ENST00000413333 TICRRQ7Z2Z1 1910 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 K7EM74 188 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 UPK1AO00322 258 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 CDIPTO14735 213 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 SLC35E2BP0CK96 405 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 M6PRP20645 277 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 NTF3P20783 257 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 BNIP2Q12982 314 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 SYCP1Q15431 976 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 ATP6AP1LQ52LC2 224 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 HSP90B2PQ58FF3 399 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 MED27Q6P2C8 311 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 PRSS54Q6PEW0 395 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 SPICQ8N5J4 248 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 SLC35G3Q8N808 338 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 CCDC12Q8WUD4 166 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 PDCD6IPQ8WUM4 868 aaKnown RBP2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 TRNT1Q96Q11 434 aaKnown RBP2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 MS4A8Q9BY19 250 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 ZNF717Q9BY31 904 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 API5Q9BZZ5 524 aaKnown RBP2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 ASB7Q9H672 318 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 SNX24Q9Y343 169 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 USH1CQ9Y6N9 552 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 URGCP-MRPS24S4R325 110 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 MAP3K19Q56UN5 1328 aa2.81□□□□□ -1.96
HMGB3P31-201ENST00000413333 VWA8A3KMH1 1905 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 COL27A1Q8IZC6 1860 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 BRWD3Q6RI45 1802 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 LRCOL1A6NCL2 159 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 SMLR1H3BR10 107 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 LGALS9O00182 355 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 UPK2O00526 184 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 UBDO15205 165 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 OR7C2O60412 319 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 MYO1DO94832 1006 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 BRI3O95415 125 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 SNRPAP09012 282 aaKnown RBP2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 RD3LP0DJH9 198 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 MPIP34949 423 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 TTPAP49638 278 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 RAB25P57735 213 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 CD164Q04900 197 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 FUT5Q11128 374 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 RAB31Q13636 194 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 ELOCQ15369 112 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 SSX1Q16384 188 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 CEACAM21Q3KPI0 293 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 SP6Q3SY56 376 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 ZNF404Q494X3 552 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 UBE2NLQ5JXB2 153 aa2.8□□□□□ -1.96
HMGB3P31-201ENST00000413333 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms