RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KDM4BO94953 1096 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 IGHV2-5P01817 119 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 HEXAP06865 529 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4L2P0CJ85 424 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4L3P0CJ86 424 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4L4P0CJ87 422 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4L5P0CJ88 424 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4L6P0CJ89 424 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4L7P0CJ90 424 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 AMY2BP19961 511 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 SEC61A1P61619 476 aaKnown RBP11.6□□□□□ -0.55
TPM3-211ENST00000368531 SCN1BQ07699 218 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 P2RY14Q15391 338 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 STUMQ69YW2 141 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
TPM3-211ENST00000368531 CDH26Q8IXH8 852 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 Q8IYB0 196 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 PXT1Q8NFP0 134 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 FOXRED1Q96CU9 486 aaPredicted RBP11.6□□□□□ -0.55
TPM3-211ENST00000368531 RAB39BQ96DA2 213 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 NAA50Q9GZZ1 169 aaKnown RBP11.6□□□□□ -0.55
TPM3-211ENST00000368531 METTL9Q9H1A3 318 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DUX4Q9UBX2 424 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 V9GY05 133 aa11.6□□□□□ -0.55
TPM3-211ENST00000368531 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 NOTCH2Q04721 2471 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 CCDC168Q8NDH2 2452 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 A0A1W2PP11 408 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 NKX6-3A6NJ46 265 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 FAM157AC9JC47 383 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 TNFRSF13BO14836 293 aaPredicted RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 PHF1O43189 567 aaPredicted RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 NDUFA2O43678 99 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 FSTL3O95633 263 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 CSTBP04080 98 aaKnown RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 INHBBP09529 407 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 WNT2P09544 360 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 CLEC2LP0C7M8 214 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 SELLP14151 372 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 RAB3BP20337 219 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 PRDX2P32119 198 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 SDC2P34741 201 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 CAV3P56539 151 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 CLDN12P56749 244 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 IKZF1Q13422 519 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 PDCD1Q15116 288 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 TMEM249Q2WGJ8 235 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 HES5Q5TA89 166 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 METAP1DQ6UB28 335 aaPredicted RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 FIP1L1Q6UN15 594 aaKnown RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 NLRC3Q7RTR2 1065 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 LYPD6Q86Y78 171 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 FGFRL1Q8N441 504 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 CD177Q8N6Q3 437 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 FAM216BQ8N7L0 139 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 ANGPTL6Q8NI99 470 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 C12orf43Q96C57 262 aaKnown RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 NEIL1Q96FI4 390 aaPredicted RBP11.59□□□□□ -0.55
TPM3-211ENST00000368531 C18orf12Q96KH6 178 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 OR8B2Q96RD0 313 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 SMR3AQ99954 134 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 UQCC2Q9BRT2 126 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 KCNK15Q9H427 330 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 CTSZQ9UBR2 303 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 ARHGAP32A7KAX9 2087 aa11.59□□□□□ -0.55
TPM3-211ENST00000368531 MYO9AB2RTY4 2548 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 KNG1P01042 644 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 IGHV4-31P0DP07 118 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 HTR2CP28335 458 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 PITPNBP48739 271 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 MTNR1BP49286 362 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 NCS1P62166 190 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 GNB2P62879 340 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 LCN2P80188 198 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 RAB11BQ15907 218 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 ESCO2Q56NI9 601 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 C1orf100Q5SVJ3 147 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 ASCL4Q6XD76 172 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 GDPGP1Q6ZNW5 385 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 SLC36A1Q7Z2H8 476 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 FAM46BQ96A09 425 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 GAFA1Q96PS6 74 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 TMUB1Q9BVT8 246 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 BANF2Q9H503 90 aa11.58□□□□□ -0.56
TPM3-211ENST00000368531 F5H0A9 414 aaPredicted RBP11.57□□□□□ -0.56
TPM3-211ENST00000368531 SLC17A2O00624 439 aa11.57□□□□□ -0.56
TPM3-211ENST00000368531 DVL1O14640 695 aa11.57□□□□□ -0.56
TPM3-211ENST00000368531 NDUFB3O43676 98 aa11.57□□□□□ -0.56
TPM3-211ENST00000368531 CRTAPO75718 401 aaPredicted RBP11.57□□□□□ -0.56
TPM3-211ENST00000368531 HAND1O96004 215 aa11.57□□□□□ -0.56
TPM3-211ENST00000368531 PSMD7P51665 324 aa11.57□□□□□ -0.56
TPM3-211ENST00000368531 CAPZA1P52907 286 aa11.57□□□□□ -0.56
TPM3-211ENST00000368531 FGF12P61328 243 aa11.57□□□□□ -0.56
TPM3-211ENST00000368531 VBP1P61758 197 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms