RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 RAE1P78406 368 aaKnown RBP11.96□□□□□ -0.5
CCDC144A-203ENST00000360495 SLC25A42Q86VD7 318 aa11.96□□□□□ -0.5
CCDC144A-203ENST00000360495 HMGCLL1Q8TB92 370 aa11.96□□□□□ -0.5
CCDC144A-203ENST00000360495 LRRC37A3O60309 1634 aa11.96□□□□□ -0.5
CCDC144A-203ENST00000360495 GAGE10A6NGK3 116 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 NMBP08949 121 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 OPRK1P41145 380 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 TMEM215Q68D42 235 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 AP5S1Q9NUS5 200 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 NEU3Q9UQ49 428 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 MICAL3Q7RTP6 2002 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 FCGR3BO75015 233 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 IGLV3-25P01717 112 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 CXCL12P48061 93 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 HINT1P49773 126 aaPredicted RBP11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 RNF165Q6ZSG1 346 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 RNF186Q9NXI6 227 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 C4BP0C0L5 1744 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 A0A1B0GV90 55 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 OR5B21A6NL26 309 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 ABLIM3O94929 683 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 RBP4P02753 201 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 MDKP21741 143 aaPredicted RBP11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 PLP1P60201 277 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 EIF4E3Q8N5X7 224 aaKnown RBP11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 OR1L3Q8NH93 324 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 PLPPR2Q96GM1 343 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 P4HTMQ9NXG6 502 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 TNFSF11O14788 317 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 ST6GAL1P15907 406 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 PGFP49763 221 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 SURF2Q15527 256 aaPredicted RBP11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 TMEM255AQ5JRV8 349 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 FER1L6-AS2Q96M78 137 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 HSPB8Q9UJY1 196 aa11.95□□□□□ -0.5
CCDC144A-203ENST00000360495 CORTO00230 105 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 SIGLEC5O15389 551 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 CBR3O75828 277 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 CXCL2P19875 107 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 SIGLEC14Q08ET2 396 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 KIAA0040Q15053 153 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 MRGPRGQ86SM5 289 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 ZNF296Q8WUU4 475 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 ZNF275Q9NSD4 429 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 TNFSF18Q9UNG2 199 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 LANCL1O43813 399 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 MUC1P15941 1255 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 G6PCP35575 357 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 COMPP49747 757 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 RRADP55042 308 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 FMODQ06828 376 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 C7orf66A4D0T2 115 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 H0YIG0 161 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 FAM3BP58499 235 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 SKP2Q13309 424 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 GAMTQ14353 236 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 TCTN1Q2MV58 587 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 TSPO2Q5TGU0 170 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 SLC35E4Q6ICL7 350 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 OR1F12Q8NHA8 337 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 PATE1Q8WXA2 126 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 TMEM167BQ9NRX6 74 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 HS3ST3A1Q9Y663 406 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 PRRC2BQ5JSZ5 2229 aaKnown RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 LNP1A1A4G5 178 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 ST8SIA5O15466 376 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 SP1P08047 785 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 PAFAH1B2P68402 229 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 SRSF9Q13242 221 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 FNDC7Q5VTL7 733 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 D2HGDHQ8N465 521 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 DOK5Q9P104 306 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 HDGFL3Q9Y3E1 203 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 CACNA1CQ13936 2221 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 DHRS3O75911 302 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 GCGP01275 180 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 MELTFP08582 738 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 RPS4XP62701 263 aaKnown RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 UBE2L3P68036 154 aaKnown RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 CPEB3Q8NE35 698 aaKnown RBP11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 OR2M3Q8NG83 312 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 OR2A5Q96R48 311 aa11.94□□□□□ -0.5
CCDC144A-203ENST00000360495 OR2T8A6NH00 312 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 CHST1O43916 411 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 APCSP02743 223 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 FGF2P09038 288 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 SEC11BP0C7V7 166 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 EWSR1Q01844 656 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 C16orf82Q7Z2V1 217 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 TRMT61AQ96FX7 289 aaKnown RBP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 OR6C3Q9NZP0 311 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 SYNGR2O43760 224 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms