RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 CLRN3Q8NCR9 226 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 OR5L1Q8NGL2 311 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
CLDN18-202ENST00000343735 CMSS1Q9BQ75 279 aaKnown RBP8.44□□□□□ -1.06
CLDN18-202ENST00000343735 ZNF319Q9P2F9 582 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 PFDN2Q9UHV9 154 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 SCP2D1Q9UJQ7 156 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 EDARQ9UNE0 448 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 SPG11Q96JI7 2443 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 C16orf97H3BN30 126 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 XRCC2O43543 280 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 CRTAPO75718 401 aaPredicted RBP8.44□□□□□ -1.06
CLDN18-202ENST00000343735 SC5DO75845 299 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 NXPH3O95157 252 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 ZNF35P13682 527 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 RAB3AP20336 220 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 TUBG1P23258 451 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 KCNJ3P48549 501 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 DOK3Q7L591 496 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 OPA3Q9H6K4 179 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 GPR84Q9NQS5 396 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 TUBG2Q9NRH3 451 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 MED12LQ86YW9 2145 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 TRBV5-5A0A0J9YX44 114 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 AIPO00170 330 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 GPR31O00270 319 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 TMEM127O75204 238 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 KNG1P01042 644 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 LCATP04180 440 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 PGAM2P15259 253 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 ASCL1P50553 236 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 MALLQ13021 153 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 MDP1Q86V88 176 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 ANGPTL5Q86XS5 388 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 FGFBP3Q8TAT2 258 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 C10orf35Q96D05 121 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 MRPS24Q96EL2 167 aaKnown RBP8.44□□□□□ -1.06
CLDN18-202ENST00000343735 GSKIPQ9P0R6 139 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 ERRFI1Q9UJM3 462 aaPredicted RBP8.44□□□□□ -1.06
CLDN18-202ENST00000343735 FOXJ3Q9UPW0 622 aa8.44□□□□□ -1.06
CLDN18-202ENST00000343735 NOP16Q9Y3C1 178 aaKnown RBP8.44□□□□□ -1.06
CLDN18-202ENST00000343735 TRAV1-2A0A0B4J238 106 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 SORDQ00796 357 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 HNF4GQ14541 408 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 SLC9A3R2Q15599 337 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 DCAF12L2Q5VW00 463 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 TMEM104Q8NE00 496 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 BVESQ8NE79 360 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 SLC30A7Q8NEW0 376 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 APOBEC3DQ96AK3 386 aaPredicted RBP8.43□□□□□ -1.06
CLDN18-202ENST00000343735 C1QTNF5Q9BXJ0 243 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 CDH20Q9HBT6 801 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 SPRY1O43609 319 aaPredicted RBP8.43□□□□□ -1.06
CLDN18-202ENST00000343735 TTRP02766 147 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 OR3A4PP47883 348 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 HOXA4Q00056 320 aaPredicted RBP8.43□□□□□ -1.06
CLDN18-202ENST00000343735 CLEC9AQ6UXN8 241 aa8.43□□□□□ -1.06
CLDN18-202ENST00000343735 CPEB3Q8NE35 698 aaKnown RBP8.43□□□□□ -1.06
CLDN18-202ENST00000343735 HDHD3Q9BSH5 251 aaPredicted RBP8.43□□□□□ -1.06
CLDN18-202ENST00000343735 PARP12Q9H0J9 701 aaKnown RBP8.43□□□□□ -1.06
CLDN18-202ENST00000343735 TMEM272A0A1B0GTI8 110 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 LOC390937A0A1W2PQ73 354 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 C5orf49A4QMS7 147 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 DHRS7CA6NNS2 312 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 TNFSF12O43508 249 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 RLN2P04090 185 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 CCL1P22362 96 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 HTR2CP28335 458 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 PRSS3P35030 304 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 NPY4RP50391 375 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 HLXQ14774 488 aaPredicted RBP8.42□□□□□ -1.06
CLDN18-202ENST00000343735 C4orf17Q53FE4 359 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 UBE2NLQ5JXB2 153 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 RBMS3Q6XE24 437 aaKnown RBP8.42□□□□□ -1.06
CLDN18-202ENST00000343735 WDR31Q8NA23 367 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 OR8B12Q8NGG6 310 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 OR1S1Q8NH92 325 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 POM121L2Q96KW2 1035 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 CNTD2Q9H8S5 307 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 NGBQ9NPG2 151 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 GPR173Q9NS66 373 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 SMG1Q96Q15 3661 aaKnown RBP8.42□□□□□ -1.06
CLDN18-202ENST00000343735 F8W036 122 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 RAB3DO95716 219 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 IGKV3-15P01624 115 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 PPA1Q15181 289 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 RSPO1Q2MKA7 263 aaPredicted RBP8.42□□□□□ -1.06
CLDN18-202ENST00000343735 FBXL19-AS1Q494R0 122 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 ASPHD2Q6ICH7 369 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 NUBP2Q9Y5Y2 271 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 PLCE1Q9P212 2302 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 RAB19A4D1S5 217 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 MEGF11A6BM72 1044 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 A8MXK9 166 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 PRSS44E7EML9 344 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 ZNF14P17017 642 aaPredicted RBP8.42□□□□□ -1.06
CLDN18-202ENST00000343735 AGAP20933 346 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 HFEQ30201 348 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 COLCA1Q6ZS62 124 aa8.42□□□□□ -1.06
CLDN18-202ENST00000343735 PGAP1Q75T13 922 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms