RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Zfp455Q7M6X9 461 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm21119Q8C646 350 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1155Q8VFR3 314 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Necap1Q9CR95 275 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r61W4VSP5 300 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Hoxa1P09022 331 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dpagt1P42867 410 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Inpp5jP59644 1003 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Bhlha9Q5RJB0 231 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr502Q8VG09 314 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Col10a1Q05306 680 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Tex261Q62302 196 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 ScapQ6GQT6 1276 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Marveld1Q7TQJ1 173 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Kirrel2Q7TSU7 700 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Hbq1aQ8BYM1 145 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mmp28Q8CGV8 520 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr341Q8VGK9 313 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 DaoP18894 345 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Art1Q60935 325 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Yif1aQ91XB7 293 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm438B1ASB3 393 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ccdc106Q3ULM0 279 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Q8C3M9 231 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 FevQ8QZW2 237 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ntng2Q8R4F1 589 aaKnown RBP15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 HnrnpllQ921F4 591 aaKnown RBP15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sbf1Q6ZPE2 1867 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cd79aP11911 220 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Selenbp1P17563 472 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Smim7Q5RKS2 75 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Adam12Q61824 903 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm5447Q8BPB2 115 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Bbs10Q9DBI2 713 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Trbc2A0A075B5J4 173 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Trbc1A0A0A6YWV4 173 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cd244Q07763 397 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 LipnQ3U4B4 400 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Galnt2Q6PB93 570 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Hs3st3a1Q8BKN6 393 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Akr7a2Q8CG76 367 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 PnpoQ91XF0 261 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Pkd1l3Q2EG98 2201 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Hmgn2P09602 90 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dus3lQ91XI1 637 aaKnown RBP15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mid1ip1Q9CQ20 182 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Znf593Q9DB42 134 aaKnown RBP15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Slc22a5Q9Z0E8 557 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 CrebbpP45481 2441 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Tcstv3O70518 169 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gdf7P43029 461 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ptx3P48759 381 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Pcolce2Q8R4W6 414 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr980Q8VH08 310 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cacna1eQ61290 2272 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Usf1Q61069 310 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fzd8Q61091 685 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr661Q99NH4 319 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Tmem30cQ9D4D7 342 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1097A2AVA9 315 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm9047B9EJX3 177 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Psg20E9Q9B4 475 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm26965M0QWH4 86 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Itgb2lQ3UV74 738 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Atpaf1Q811I0 324 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Aqp6Q8C4A0 293 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sirt4Q8R216 333 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1431Q8VF59 312 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Bpnt1Q9Z0S1 308 aa15.1■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Tex45G3XA23 500 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Tas2r41P59532 308 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Spin2cQ6NVE3 257 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rnf113a1Q8R3P8 341 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr206Q8VGP9 306 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Tp73Q9JJP2 631 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 1700001O22RikA2APZ1 375 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Slc18a3O35304 530 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mfsd12Q3U481 476 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Lin28bQ45KJ6 247 aaKnown RBP15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ceacam14Q78Y72 263 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Nmes1Q810Q5 83 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr112Q8C0S2 320 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Clec2dQ91V08 207 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Phf1Q9Z1B8 559 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm21778A0A087WNP8 232 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 8030474K03RikE9Q4Y8 554 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Neil3Q8K203 606 aaKnown RBP15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Nicn1Q9CQM0 213 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gar1Q9CY66 231 aaKnown RBP15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 ManbalQ9D8X0 85 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rtp4Q9ER80 249 aaKnown RBP15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Btbd35f23A0A0R4J2B9 498 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm3486L7N2D0 199 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sftpa1P35242 248 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dok1P97465 482 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr142Q60881 305 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Kctd12Q6WVG3 327 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ropn1lQ9EQ00 218 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mettl23A2AA28 253 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1406E9Q8X1 310 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms