RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
HDDC2-204ENST00000608295 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 HOXA3O43365 443 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 SPRY1O43609 319 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 ECDO95905 644 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 LIPFP07098 398 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 AZGP1P25311 298 aaKnown RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 GTF2A1P52655 376 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 CNN3Q15417 329 aaKnown RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 TMEM244Q5VVB8 128 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 XAF1Q6GPH4 301 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 KRT74Q7RTS7 529 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 RNF144BQ7Z419 303 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 OR4M1Q8NGD0 313 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 GATAD2BQ8WXI9 593 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 MRPL48Q96GC5 212 aaKnown RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 MED30Q96HR3 178 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 NKX3-1Q99801 234 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-204ENST00000608295 NRIP2Q9BQI9 281 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 CNTD2Q9H8S5 307 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 HHLA2Q9UM44 414 aa11.93□□□□□ -0.5
HDDC2-204ENST00000608295 IGHV1-69DA0A0B4J2H0 117 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 IGKV1-9A0A0C4DH69 117 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 A0A0U1RQK1 487 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 OR4C45A6NMZ5 311 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 SLC1A7O00341 560 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 ANGPTL7O43827 346 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 SERPINA3P01011 423 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 GNAO1P09471 354 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 DUSP1P28562 367 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 SOX2P48431 317 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 ETV1P50549 477 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 RAB40BQ12829 278 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 ATPAF1Q5TC12 328 aaPredicted RBP11.92□□□□□ -0.5
HDDC2-204ENST00000608295 Q6ZSR3 168 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 DHRSXQ8N5I4 330 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 EMG1Q92979 244 aaKnown RBP11.92□□□□□ -0.5
HDDC2-204ENST00000608295 CEP19Q96LK0 163 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 NEK6Q9HC98 313 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
HDDC2-204ENST00000608295 MTCH1Q9NZJ7 389 aa11.92□□□□□ -0.5
HDDC2-204ENST00000608295 ZFPL1O95159 310 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 LIMS3P0CW19 117 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 LIMS4P0CW20 117 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 ATF1P18846 271 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 BCL3P20749 454 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 PRTN3P24158 256 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 MPZP25189 248 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 PRDX2P32119 198 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 FUT6P51993 359 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 GBX2P52951 348 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-204ENST00000608295 MTCP1P56278 107 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 IL24Q13007 206 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 EDDM3AQ14507 147 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 PDCD1Q15116 288 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 CMTM4Q8IZR5 234 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 SYS1Q8N2H4 156 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 Q8N7P7 452 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 ZFP41Q8N8Y5 198 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 LY6G5BQ8NDX9 201 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 FAM216AQ8WUB2 273 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 PP6455Q8WZ26 134 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 RDH12Q96NR8 316 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 OPALINQ96PE5 141 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 ZNF649Q9BS31 505 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 PKIBQ9C010 78 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 COMMD4Q9H0A8 199 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
HDDC2-204ENST00000608295 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-204ENST00000608295 TRBV2A0A0J9YWF9 115 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 PNMA8CA0A1B0GUJ8 204 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 H0YAE9 185 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 XPNPEP2O43895 674 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 HCKP08631 526 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 CCL3L1P16619 93 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 PRKACAP17612 351 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 OMGP23515 440 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 NPBWR2P48146 333 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 RBP2P50120 134 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 ATP1B3P54709 279 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 CAV3P56539 151 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 ERVFRD-1P60508 538 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 COL10A1Q03692 680 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 KLHL22Q53GT1 634 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 OGFRL1Q5TC84 451 aaPredicted RBP11.9□□□□□ -0.5
HDDC2-204ENST00000608295 FDX2Q6P4F2 183 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 KCTD20Q7Z5Y7 419 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 SETD9Q8NE22 299 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 OR13C5Q8NGS8 318 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 OR5AK2Q8NH90 309 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 ZFAND2BQ8WV99 257 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 SDSLQ96GA7 329 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 CHST6Q9GZX3 395 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 INPP5EQ9NRR6 644 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 RASL12Q9NYN1 266 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 CLEC2DQ9UHP7 191 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 DHDHQ9UQ10 334 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms