RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 RFKQ969G6 155 aa18.4■□□□□ 0.54
RBFOX1-219ENST00000569895 CENPNQ96H22 339 aaPredicted RBP18.4■□□□□ 0.54
RBFOX1-219ENST00000569895 OSBPL10Q9BXB5 764 aa18.4■□□□□ 0.54
RBFOX1-219ENST00000569895 OR14J1Q9UGF5 321 aa18.4■□□□□ 0.54
RBFOX1-219ENST00000569895 A0A1W2PQL4 384 aaPredicted RBP18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 A6NIN4 97 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 SYT7O43581 403 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 CIB2O75838 187 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 SERPINA3P01011 423 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 IL24Q13007 206 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 CALHM1Q8IU99 346 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 MKXQ8IYA7 352 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 OR10H4Q8NGA5 316 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 SSX3Q99909 188 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 MMP27Q9H306 513 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 RIBC2Q9H4K1 309 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 HES4Q9HCC6 221 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 USE1Q9NZ43 259 aa18.39■□□□□ 0.53
RBFOX1-219ENST00000569895 FAM230AA0A1W2PPH8 454 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 KCNAB3O43448 404 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 GATBO75879 557 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 TK1P04183 234 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 LGALS4P56470 323 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 CDC42P60953 191 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 AANATQ16613 207 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 ODF4Q2M2E3 257 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 HCP5Q6MZN7 132 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 SSX6Q7RTT6 188 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 CATSPERDQ86XM0 798 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 ANGPTL5Q86XS5 388 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 OR4M1Q8NGD0 313 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 UBE2FQ969M7 185 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 GABARAPL3Q9BY60 117 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 MEGF9Q9H1U4 602 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 PPA2Q9H2U2 334 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 RAB18Q9NP72 206 aa18.38■□□□□ 0.53
RBFOX1-219ENST00000569895 PKD1L1Q8TDX9 2849 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 H3BUX3 64 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 POLR2IP36954 125 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 FUT6P51993 359 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 KRTAP10-3P60369 221 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 ERVFRD-1P60508 538 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 DEFA6Q01524 100 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 FAM220AQ7Z4H9 259 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 DTX3Q8N9I9 347 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 TRMT10AQ8TBZ6 339 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 C10orf35Q96D05 121 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 RBM4BQ9BQ04 359 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 OAZ3Q9UMX2 235 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 TRRAPQ9Y4A5 3859 aa18.37■□□□□ 0.53
RBFOX1-219ENST00000569895 CHRM2P08172 466 aa18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 CEBPDP49716 269 aaPredicted RBP18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 ERVK11-1P61568 191 aa18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 LRRC75BQ2VPJ9 315 aa18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 ASPHD2Q6ICH7 369 aa18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 SLC35E4Q6ICL7 350 aa18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 TRUB1Q8WWH5 349 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 RORBQ92753 470 aa18.36■□□□□ 0.53
RBFOX1-219ENST00000569895 K7N7A8 449 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 APOL3O95236 402 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 GABRA5P31644 462 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 BATF2Q8N1L9 274 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 ASCC1Q8N9N2 400 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 BORCS8Q96FH0 119 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 CEP19Q96LK0 163 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 IMPAD1Q9NX62 359 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 FBLN5Q9UBX5 448 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 ORC6Q9Y5N6 252 aa18.35■□□□□ 0.53
RBFOX1-219ENST00000569895 UBCP0CG48 685 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 COL10A1Q03692 680 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 CNN3Q15417 329 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 UBE2V2Q15819 145 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 C11orf88Q6PI97 169 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 GDPD3Q7L5L3 318 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 KCTD20Q7Z5Y7 419 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 C11orf42Q8N5U0 333 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 C17orf50Q8WW18 174 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 EME1Q96AY2 570 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 CHST5Q9GZS9 411 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 GNG8Q9UK08 70 aa18.34■□□□□ 0.53
RBFOX1-219ENST00000569895 MEGF8Q7Z7M0 2845 aa18.33■□□□□ 0.53
RBFOX1-219ENST00000569895 SAC3D1A6NKF1 404 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 H3BSH0 61 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 CCL3L1P16619 93 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 COX7A1P24310 79 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 LIAT1Q6ZQX7 453 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 EGFL6Q8IUX8 553 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 Q8IYB0 196 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 PP6455Q8WZ26 134 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 MTCH1Q9NZJ7 389 aa18.33■□□□□ 0.52
RBFOX1-219ENST00000569895 CYB5AP00167 134 aa18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 PIPP12273 146 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 ATP1B3P54709 279 aa18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 EDDM3BP56851 147 aa18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 ZNF273Q14593 569 aa18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 LY6EQ16553 131 aa18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 PDLIM3Q53GG5 364 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 TMEM244Q5VVB8 128 aa18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 SLC25A26Q70HW3 274 aa18.32■□□□□ 0.52
RBFOX1-219ENST00000569895 ENTHD1Q8IYW4 607 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms