RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 OR5D13Q8NGL4 314 aa14.45□□□□□ -0.1
NME3-205ENST00000563854 RORBQ92753 470 aa14.45□□□□□ -0.1
NME3-205ENST00000563854 RFKQ969G6 155 aa14.45□□□□□ -0.1
NME3-205ENST00000563854 SF3B6Q9Y3B4 125 aaKnown RBP14.45□□□□□ -0.1
NME3-205ENST00000563854 ORC6Q9Y5N6 252 aa14.45□□□□□ -0.1
NME3-205ENST00000563854 LOC107986453A0A1B0GWG9 222 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 A0A1W2PPH5 198 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 DHRS7CA6NNS2 312 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 WIPF1O43516 503 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 CCL3L1P16619 93 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 CCL1P22362 96 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 COX7A1P24310 79 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 ACSM1Q08AH1 577 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 LINC01006Q8NI28 216 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 C17orf50Q8WW18 174 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 UBE2FQ969M7 185 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 SLAMF9Q96A28 289 aa14.44□□□□□ -0.1
NME3-205ENST00000563854 PKD1L1Q8TDX9 2849 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 MEX3AA1L020 520 aaKnown RBP14.43□□□□□ -0.1
NME3-205ENST00000563854 H3BUX3 64 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 EI24O14681 340 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 NOS1APO75052 506 aaPredicted RBP14.43□□□□□ -0.1
NME3-205ENST00000563854 GATBO75879 557 aaKnown RBP14.43□□□□□ -0.1
NME3-205ENST00000563854 SULT1C4O75897 302 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 MPZP25189 248 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 PAX6P26367 422 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 KRTAP10-3P60369 221 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 ZNF85Q03923 595 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 KPNB1Q14974 876 aaKnown RBP14.43□□□□□ -0.1
NME3-205ENST00000563854 UBE2V2Q15819 145 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 ZIK1Q3SY52 487 aaPredicted RBP14.43□□□□□ -0.1
NME3-205ENST00000563854 TMEM200BQ69YZ2 307 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 HCP5Q6MZN7 132 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 Q6ZSV7 163 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 PRSS35Q8N3Z0 413 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 PKIBQ9C010 78 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 PPA2Q9H2U2 334 aa14.43□□□□□ -0.1
NME3-205ENST00000563854 MEGF8Q7Z7M0 2845 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 TK1P04183 234 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 KIR3DL2P43630 455 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 BMXP51813 675 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 EDDM3BP56851 147 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 ERVFRD-1P60508 538 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 COL10A1Q03692 680 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 IL24Q13007 206 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 TMED1Q13445 227 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 ZNF273Q14593 569 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 LY6EQ16553 131 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 ZNF782Q6ZMW2 699 aaPredicted RBP14.42□□□□□ -0.1
NME3-205ENST00000563854 Q6ZSR3 168 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 RDH10Q8IZV5 341 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 OR5R1Q8NH85 324 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 RNFT2Q96EX2 444 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 BORCS8Q96FH0 119 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 CEP19Q96LK0 163 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 CITED1Q99966 193 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 HES4Q9HCC6 221 aa14.42□□□□□ -0.1
NME3-205ENST00000563854 IGKV1-27A0A075B6S5 117 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 hCG_1809904A0A1W2PP81 198 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 A0A1W2PPE2 198 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 A0A1W2PR64 198 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 A0A1W2PRV1 198 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 DAPL1A0PJW8 107 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 ENTPD6O75354 484 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 SERPINA3P01011 423 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 UBCP0CG48 685 aaKnown RBP14.41□□□□□ -0.1
NME3-205ENST00000563854 FUT6P51993 359 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 CNN3Q15417 329 aaKnown RBP14.41□□□□□ -0.1
NME3-205ENST00000563854 MIDNQ504T8 468 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 SLC25A26Q70HW3 274 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 ZSCAN4Q8NAM6 433 aaPredicted RBP14.41□□□□□ -0.1
NME3-205ENST00000563854 BEND2Q8NDZ0 799 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 EMG1Q92979 244 aaKnown RBP14.41□□□□□ -0.1
NME3-205ENST00000563854 SSX3Q99909 188 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 CHST5Q9GZS9 411 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 HEXA-AS1Q9H8Q6 139 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 USE1Q9NZ43 259 aa14.41□□□□□ -0.1
NME3-205ENST00000563854 F8VVB4 439 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 F8VWA3 439 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 M0QZ24 198 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 ALPLP05186 524 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 ZNF20P17024 532 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 TGFBR2P37173 567 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 POU3F4P49335 361 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 SNU13P55769 128 aaKnown RBP14.4□□□□□ -0.1
NME3-205ENST00000563854 LGALS4P56470 323 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 PROK1P58294 105 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 ERVK11-1P61568 191 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 ACTC1P68032 377 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 ACTA1P68133 377 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 EDDM3AQ14507 147 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 CCDC121Q6ZUS5 278 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 GDPD3Q7L5L3 318 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 TCF7L1Q9HCS4 588 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 MTCH1Q9NZJ7 389 aa14.4□□□□□ -0.1
NME3-205ENST00000563854 H3BNX3 289 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 TIMM23O14925 209 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 KCNAB3O43448 404 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 CHRM2P08172 466 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 OCM2P0CE71 109 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms