RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 YIPF7Q8N8F6 280 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 TBX5Q99593 518 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 CIB1Q99828 191 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 SSX3Q99909 188 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 PKIBQ9C010 78 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 FAM234AQ9H0X4 552 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 HES4Q9HCC6 221 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 USE1Q9NZ43 259 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 OR14J1Q9UGF5 321 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 A6NIN4 97 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 RPP14O95059 124 aaKnown RBP11.54□□□□□ -0.56
SNX6-210ENST00000557341 TK1P04183 234 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 IL24Q13007 206 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 C2orf68Q2NKX9 166 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 LRRC75BQ2VPJ9 315 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 CALHM1Q8IU99 346 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 BATF2Q8N1L9 274 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 OR4M1Q8NGD0 313 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
SNX6-210ENST00000557341 C17orf50Q8WW18 174 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 HEXA-AS1Q9H8Q6 139 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 FAM53CQ9NYF3 392 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 SLC7A11Q9UPY5 501 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 SLC22A13Q9Y226 551 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 AP4S1Q9Y587 144 aa11.54□□□□□ -0.56
SNX6-210ENST00000557341 FAM230AA0A1W2PPH8 454 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 A0A1W2PQL4 384 aaPredicted RBP11.53□□□□□ -0.56
SNX6-210ENST00000557341 SYT7O43581 403 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 GATBO75879 557 aaKnown RBP11.53□□□□□ -0.56
SNX6-210ENST00000557341 OR2T7P0C7T2 308 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 CCL3L1P16619 93 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 HTR1FP30939 366 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 GABRA5P31644 462 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 ERVFRD-1P60508 538 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 ZNF273Q14593 569 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 AANATQ16613 207 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 ODF4Q2M2E3 257 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 TMEM200BQ69YZ2 307 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 SLC35E4Q6ICL7 350 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 AMIGO2Q86SJ2 522 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 ASCC1Q8N9N2 400 aaKnown RBP11.53□□□□□ -0.56
SNX6-210ENST00000557341 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 OR2T27Q8NH04 317 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 GABARAPL3Q9BY60 117 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 MEGF9Q9H1U4 602 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 RAB18Q9NP72 206 aa11.53□□□□□ -0.56
SNX6-210ENST00000557341 METTL15A6NJ78 407 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 SULT1C4O75897 302 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 APOL3O95236 402 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 TSPAN15O95858 294 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 PIPP12273 146 aaPredicted RBP11.52□□□□□ -0.57
SNX6-210ENST00000557341 COX7A1P24310 79 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 ATP6V1E1P36543 226 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 BMXP51813 675 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 LGALS4P56470 323 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 ERVK11-1P61568 191 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 LY6EQ16553 131 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 C11orf88Q6PI97 169 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 LIAT1Q6ZQX7 453 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 FAM220AQ7Z4H9 259 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 ANGPTL5Q86XS5 388 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 C11orf42Q8N5U0 333 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 CCDC54Q8NEL0 328 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 OR10H4Q8NGA5 316 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 OR8J1Q8NGP2 316 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 RORBQ92753 470 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 RFKQ969G6 155 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 AJUBAQ96IF1 538 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 CEP19Q96LK0 163 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 CHST5Q9GZS9 411 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 RIBC2Q9H4K1 309 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 RANBP3Q9H6Z4 567 aaPredicted RBP11.52□□□□□ -0.57
SNX6-210ENST00000557341 FBLN5Q9UBX5 448 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 OAZ3Q9UMX2 235 aa11.52□□□□□ -0.57
SNX6-210ENST00000557341 PLXNB1O43157 2135 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 PRKDCP78527 4128 aaKnown RBP11.51□□□□□ -0.57
SNX6-210ENST00000557341 H3BSH0 61 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 K7N7A8 449 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 ATP5HO75947 161 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 UBCP0CG48 685 aaKnown RBP11.51□□□□□ -0.57
SNX6-210ENST00000557341 COL10A1Q03692 680 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 TMED1Q13445 227 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 CNN3Q15417 329 aaKnown RBP11.51□□□□□ -0.57
SNX6-210ENST00000557341 UBE2V2Q15819 145 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 ZNF782Q6ZMW2 699 aaPredicted RBP11.51□□□□□ -0.57
SNX6-210ENST00000557341 C10orf35Q96D05 121 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 ADI1Q9BV57 179 aa11.51□□□□□ -0.57
SNX6-210ENST00000557341 LOC107986453A0A1B0GWG9 222 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 SERPINA3P01011 423 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 RBP4P02753 201 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 CHRM2P08172 466 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 PAX6P26367 422 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 POLR2IP36954 125 aaKnown RBP11.5□□□□□ -0.57
SNX6-210ENST00000557341 FUT6P51993 359 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 EFNB2P52799 333 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 EDDM3BP56851 147 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 CDC42P60953 191 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 Q6ZTK2 550 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms