RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 PLEK2Q9NYT0 353 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF346Q9UL40 294 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 PI4KAP42356 2102 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 A0A087WV48 116 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF726A6NNF4 738 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RIIAD1A6NNX1 92 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 M0QZ24 198 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF208O43345 1280 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 SCRG1O75711 98 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CER1O95813 267 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 HLA-AP01891 365 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CSF1P09603 554 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ACKR3P25106 362 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 GLP1RP43220 463 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RPS11P62280 158 aaKnown RBP eCLIP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF345Q14585 488 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ATG4DQ86TL0 474 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF440Q8IYI8 595 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 BOD1L2Q8IYS8 172 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 JAGN1Q8N5M9 183 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 C11orf42Q8N5U0 333 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 APCDD1LQ8NCL9 501 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 TOMM40LQ969M1 308 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CMC2Q9NRP2 79 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 OCIAD1Q9NX40 245 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 UNC13CQ8NB66 2214 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 TRAV26-1A0A087WT03 109 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 IGHV3-20A0A0C4DH32 117 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CDC14CA4D256 554 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 C17orf51A8MQB3 221 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 C9JQL5 133 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 H7C417 338 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 FGF16O43320 207 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 GDF9O60383 454 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 GLSO94925 669 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RCBTB2O95199 551 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 PMS2P2O95744 297 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 SFTPBP07988 381 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ITGA5P08648 1049 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RAB40ALP0C0E4 278 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CALCBP10092 127 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CD79AP11912 226 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 SLC2A5P22732 501 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ID1P41134 155 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 MMP16P51512 607 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RPS4XP62701 263 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CXADRP78310 365 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ARF1P84077 181 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 LTBQ06643 244 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 KIAA0141Q14154 515 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 STEAP1BQ6NZ63 245 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ST6GALNAC3Q8NDV1 305 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 SECTM1Q8WVN6 248 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RAB40AQ8WXH6 277 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RAB1CQ92928 201 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 SPSB1Q96BD6 273 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ZBTB8AQ96BR9 441 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RASD2Q96D21 266 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 TNFRSF13CQ96RJ3 184 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ADOQ96SZ5 270 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 TBL1XR1Q9BZK7 514 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 MSL2Q9HCI7 577 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 INPP5EQ9NRR6 644 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 P4HTMQ9NXG6 502 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 MTFP1Q9UDX5 166 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 RARRES3Q9UL19 164 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 A0A1W2PQD3 144 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 FBLL1A6NHQ2 334 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF587BE7ETH6 402 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 LILRA1O75019 489 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 AMY2AP04746 511 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 FGF5P12034 268 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 EPHA1P21709 976 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ATP5J2P56134 94 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF117Q03924 483 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ZFP36L1Q07352 338 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 DHRS2Q13268 280 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 NKPD1Q17RQ9 610 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 AWAT1Q58HT5 328 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 DHRS11Q6UWP2 260 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ABHD12BQ7Z5M8 362 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 FAM219AQ8IW50 185 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 OR5L1Q8NGL2 311 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 MIB2Q96AX9 1013 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 PIK3IP1Q96FE7 263 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 PARP12Q9H0J9 701 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 KCNK15Q9H427 330 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 MMP25Q9NPA2 562 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 FRYLO94915 3013 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 EXPH5Q8NEV8 1989 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 CABIN1Q9Y6J0 2220 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 C7orf77A4D0Y5 90 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ADAM20O43506 726 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 RAMP3O60896 148 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 WISP1O95388 367 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 IL12BP29460 328 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 RPS10P46783 165 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 EGR4Q05215 589 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 RBPJQ06330 500 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms