RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TMEM14DPA8MWL7 114 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 C1orf196B1AJZ1 125 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 C17orf105B2RV13 164 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM150CB9EJG8 249 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 EEF1E1-BLOC1S5C9J1V9 151 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPA7E9PJI5 369 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 C16orf97H3BN30 126 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 I3L1I5 382 aaPredicted RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SULT2B1O00204 365 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 DCTN6O00399 190 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 DVL1O14640 695 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 NUPL2O15504 423 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 DHHO43323 396 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SYT7O43581 403 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 HCRTR1O43613 425 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 FADS1O60427 444 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TSPAN2O60636 221 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC16A7O60669 478 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPB7O75200 414 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SRSF10O75494 262 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 STK17BO94768 372 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 AKR7A3O95154 331 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 UTS2O95399 124 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SFT2D2O95562 160 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 EML2O95834 649 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 IFNA17P01571 189 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHMP01871 453 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 HLA-AP01891 365 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 STATHP02808 62 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 BGLAPP02818 100 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 CSTBP04080 98 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 GAPDHP04406 335 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 S100A8P05109 93 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 GLAP06280 429 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 S100A6P06703 90 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 CRHP06850 196 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PRSS1P07477 247 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SEC11BP0C7V7 166 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PET100P0DJ07 73 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPA8P0DM63 369 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PTHLHP12272 177 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ICAM2P13598 275 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF35P13682 527 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PGAM2P15259 253 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 FOSL2P15408 326 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 AKR1C4P17516 323 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PVALBP20472 110 aaPredicted RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 GLRA1P23415 457 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PAX6P26367 422 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 LAP3P28838 519 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 GDI1P31150 447 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 CTNNB1P35222 781 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF93P35789 620 aaPredicted RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SERPINF1P36955 418 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 KIR3DL2P43630 455 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 FASLGP48023 281 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 MEOX2P50222 304 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SULT1A2P50226 295 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 DAP3P51398 398 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ARHGDIBP52566 201 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 EFNB2P52799 333 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ATP1B3P54709 279 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 EMP2P54851 167 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM50BP56557 158 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC26A5P58743 744 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 RAB5BP61020 215 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 LSM6P62312 80 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 RPS15P62841 145 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 OC90Q02509 493 aaPredicted RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ECH1Q13011 328 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PLA2G7Q13093 441 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PDZK1IP1Q13113 114 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 EIF2B1Q14232 305 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ACKR1Q16570 336 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF239Q16600 458 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 EIF2S3LQ2VIR3 472 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SCGB2B2Q4G0G5 96 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 WDR38Q5JTN6 314 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 VAX1Q5SQQ9 334 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 AVPI1Q5T686 147 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ASPHD1Q5U4P2 390 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 C1orf140Q5VVS0 124 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 PMS2CLQ68D20 193 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 DGAT2L7PQ6IED9 249 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 CBLN3Q6UW01 205 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ATRAIDQ6UW56 229 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 BTNL8Q6UX41 500 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 C17orf107Q6ZR85 190 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 Q6ZSR3 168 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 HIST2H3AQ71DI3 136 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 KCTD9Q7L273 389 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 GRINAQ7Z429 371 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 DCXRQ7Z4W1 244 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TMED4Q7Z7H5 227 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 GKN2Q86XP6 184 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SGPP2Q8IWX5 399 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM71E2Q8N5Q1 922 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TEX45Q8NA69 505 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 UBAC2Q8NBM4 344 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms