RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SLC25A38Q96DW6 304 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 POM121Q96HA1 1249 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 NEDD4LQ96PU5 975 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 RAB1BQ9H0U4 201 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 KCNK15Q9H427 330 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 AKIP1Q9NQ31 210 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 CBLN4Q9NTU7 201 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 PPP1R3CQ9UQK1 317 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 KMT2BQ9UMN6 2715 aaPredicted RBP8.29□□□□□ -1.08
CCM2-204ENST00000470837 RTTNQ86VV8 2226 aa8.29□□□□□ -1.08
CCM2-204ENST00000470837 TRAV18A0A075B6X5 111 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 IFNL4K9M1U5 179 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 LDLRAD4O15165 306 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 XRCC3O43542 346 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 SYNGR1O43759 233 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 CD55P08174 381 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 ADH4P08319 380 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 PRKACAP17612 351 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 BCL3P20749 454 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 GLRA1P23415 457 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 LOXP28300 417 aaPredicted RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 BLVRBP30043 206 aaPredicted RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 GATA4P43694 442 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 VEGFCP49767 419 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 PPOXP50336 477 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 EFNB2P52799 333 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 PPP5CP53041 499 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 GMFBP60983 142 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 FGF12P61328 243 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 MRPS10P82664 201 aaKnown RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 MAB21L1Q13394 359 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 UNC119Q13432 240 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 MADCAM1Q13477 382 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 SMIM21Q3B7S5 101 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 TRIQKQ629K1 86 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 SP5Q6BEB4 398 aaPredicted RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 ELP2Q6IA86 826 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 RNF144BQ7Z419 303 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 LINC00596Q86U02 117 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 MOGAT3Q86VF5 341 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 SNX29P2Q8IUI4 249 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 IZUMO1Q8IYV9 350 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 OR8H2Q8N162 312 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 FAM58AQ8N1B3 248 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 GDPD1Q8N9F7 314 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 DTX3Q8N9I9 347 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 TMEM104Q8NE00 496 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 OR10R2Q8NGX6 335 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 LILRB1Q8NHL6 650 aaPredicted RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 GTF3AQ92664 365 aaKnown RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 RAB3CQ96E17 227 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 NUDT16L1Q9BRJ7 211 aaKnown RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 CCDC32Q9BV29 185 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 FGF23Q9GZV9 251 aaPredicted RBP8.28□□□□□ -1.08
CCM2-204ENST00000470837 TLNRD1Q9H1K6 362 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 SPACA1Q9HBV2 294 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 PLEKHJ1Q9NW61 149 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 RASL12Q9NYN1 266 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 MTCH1Q9NZJ7 389 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 DNAJB11Q9UBS4 358 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 ST3GAL6Q9Y274 331 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 NPTNQ9Y639 398 aa8.28□□□□□ -1.08
CCM2-204ENST00000470837 IGKV1-12A0A0C4DH73 117 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 A0A0G2JMP0 313 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 A0A0X1KG70 313 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A10PA6NDY2 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A18PA6NE21 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A16PA6NEW6 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A20PA6NIJ5 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A8PA6NJQ4 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A7PA6NKC0 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A22PA8MWA6 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A12PA8MX19 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A5PA8MXJ8 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A23PA8MXZ1 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 AKR7A2O43488 359 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 RHBDL1O75783 438 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 OR7C1O76099 320 aaPredicted RBP8.27□□□□□ -1.09
CCM2-204ENST00000470837 IGKV1D-12P01611 117 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 SFTPBP07988 381 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 ACAA1P09110 424 aaPredicted RBP8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A15PP0C7V4 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A13PP0C7W8 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A14PP0C7W9 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 FAM90A24PP0C7X0 464 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 RNF224P0DH78 156 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 PGA5P0DJD9 388 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 NPBWR2P48146 333 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 SNU13P55769 128 aaKnown RBP8.27□□□□□ -1.09
CCM2-204ENST00000470837 RBM11P57052 281 aaKnown RBP8.27□□□□□ -1.09
CCM2-204ENST00000470837 TAS2R20P59543 309 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 QRFPP83859 136 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 TLE4Q04727 773 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 IKZF1Q13422 519 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 DCTN2Q13561 401 aaKnown RBP8.27□□□□□ -1.09
CCM2-204ENST00000470837 MPPED2Q15777 294 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 SWI5Q1ZZU3 235 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 MPV17LQ2QL34 196 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 NKAPLQ5M9Q1 402 aa8.27□□□□□ -1.09
CCM2-204ENST00000470837 ATAD3CQ5T2N8 411 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms