RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 SMIM21Q3B7S5 101 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 YIF1BQ5BJH7 314 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 BTNL3Q6UXE8 466 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 ACP7Q6ZNF0 438 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 RGP1Q92546 391 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-206ENST00000468253 OPALINQ96PE5 141 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 MND1Q9BWT6 205 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 RASSF4Q9H2L5 321 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 Q9H521 79 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 OPN4Q9UHM6 478 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 IGHV2-70DA0A0C4DH43 119 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 DVL1O14640 695 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 AVPP01185 164 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 OCM2P0CE71 109 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 OCMP0CE72 109 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-206ENST00000468253 SRP14P37108 136 aaKnown RBP16.63■□□□□ 0.25
NPHP4-206ENST00000468253 GPR50Q13585 617 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 C1orf229Q6ZS94 237 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-206ENST00000468253 Q8IYB0 196 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 OR5T2Q8NGG2 359 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 NPRL2Q8WTW4 380 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 TSEN15Q8WW01 171 aaKnown RBP16.63■□□□□ 0.25
NPHP4-206ENST00000468253 SDSLQ96GA7 329 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 RHOFQ9HBH0 211 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 PAK1IP1Q9NWT1 392 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-206ENST00000468253 MTCH1Q9NZJ7 389 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 ZNF222Q9UK12 451 aa16.63■□□□□ 0.25
NPHP4-206ENST00000468253 IGKV1D-17A0A075B6S4 117 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 TRBV5-5A0A0J9YX44 114 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 SIGLEC5O15389 551 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 NDUFB3O43676 98 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 SULT1B1O43704 296 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 GPX5O75715 221 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 NXPH2O95156 264 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 CYB5AP00167 134 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 GMFBP60983 142 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 IL13RA1P78552 427 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 PDZK1IP1Q13113 114 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 SCGB2A2Q13296 93 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 SPHARQ15513 63 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 LRRC10Q5BKY1 277 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 PRSS48Q7RTY5 328 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 SAXO1Q8IYX7 474 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 OR13C9Q8NGT0 318 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 NANPQ8TBE9 248 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 PGLYRP3Q96LB9 341 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 CEP19Q96LK0 163 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 CNBD2Q96M20 576 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 NUDT16L1Q9BRJ7 211 aaKnown RBP16.62■□□□□ 0.25
NPHP4-206ENST00000468253 SNTG1Q9NSN8 517 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 BLOC1S6Q9UL45 172 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 AUP1Q9Y679 476 aa16.62■□□□□ 0.25
NPHP4-206ENST00000468253 NKX6-3A6NJ46 265 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 RGS10O43665 173 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 ENSAO43768 121 aaKnown RBP16.61■□□□□ 0.25
NPHP4-206ENST00000468253 KNG1P01042 644 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 ALDOBP05062 364 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 CELP19835 753 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 RAB3AP20336 220 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 PRDX2P32119 198 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 CAV3P56539 151 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 RPS11P62280 158 aaKnown RBP eCLIP16.61■□□□□ 0.25
NPHP4-206ENST00000468253 Q499Y3 187 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 SLC25A26Q70HW3 274 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 C1QL2Q7Z5L3 287 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 PNLDC1Q8NA58 520 aaKnown RBP16.61■□□□□ 0.25
NPHP4-206ENST00000468253 ZSCAN4Q8NAM6 433 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-206ENST00000468253 TMEM106AQ96A25 262 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 CPNE2Q96FN4 548 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-206ENST00000468253 GAFA1Q96PS6 74 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 MRI1Q9BV20 369 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 YTHDF1Q9BYJ9 559 aaKnown RBP16.61■□□□□ 0.25
NPHP4-206ENST00000468253 SMURF1Q9HCE7 757 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 ISYNA1Q9NPH2 558 aa16.61■□□□□ 0.25
NPHP4-206ENST00000468253 LSM2Q9Y333 95 aaKnown RBP16.61■□□□□ 0.25
NPHP4-206ENST00000468253 ARHGAP32A7KAX9 2087 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 RFPL4AA6NLU0 287 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 RFPL4AL1F8VTS6 287 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 MRPS14O60783 128 aaKnown RBP16.6■□□□□ 0.25
NPHP4-206ENST00000468253 FCN3O75636 299 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 BTN2A1Q7KYR7 527 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 MS4A15Q8N5U1 240 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 LY6G5BQ8NDX9 201 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 THRSPQ92748 146 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 ZNF488Q96MN9 340 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 METRNQ9UJH8 293 aa16.6■□□□□ 0.25
NPHP4-206ENST00000468253 C22orf46C9J442 243 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 MAGEB3O15480 346 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 RRP9O43818 475 aaKnown RBP16.59■□□□□ 0.25
NPHP4-206ENST00000468253 GABRA2P47869 451 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 SOX2P48431 317 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 KISS1Q15726 138 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 IL17RELQ6ZVW7 336 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 PRIMA1Q86XR5 153 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 ZNF561Q8N587 486 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 FAM216BQ8N7L0 139 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 ZFP41Q8N8Y5 198 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 SGCDQ92629 289 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 CNTD2Q9H8S5 307 aa16.59■□□□□ 0.25
NPHP4-206ENST00000468253 RPUSD1Q9UJJ7 312 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms