RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ZNF205O95201 554 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 TGFAP01135 160 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 LHBP01229 141 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 IGHV2-5P01817 119 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 GYPAP02724 150 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 MSMBP08118 114 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 ACAA1P09110 424 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-206ENST00000462613 PGA5P0DJD9 388 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 HNF1AP20823 631 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 GALP22466 123 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 GATA3P23771 443 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 CD80P33681 288 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 PMELP40967 661 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 GABRA2P47869 451 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 PITPNBP48739 271 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 CAPZA1P52907 286 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 IL13RA1P78552 427 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 PDZK1IP1Q13113 114 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 C11orf91Q3C1V1 193 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 SPRNQ5BIV9 151 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 SPIN3Q5JUX0 258 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 TEX36Q5VZQ5 186 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 CD276Q5ZPR3 534 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 AWAT2Q6E213 333 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 BTNL3Q6UXE8 466 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 ANGPTL5Q86XS5 388 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 CALHM1Q8IU99 346 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 CDH26Q8IXH8 852 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 C11orf53Q8IXP5 236 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 FAM58AQ8N1B3 248 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 MAPK1IP1LQ8NDC0 245 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 PXT1Q8NFP0 134 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 OR51A2Q8NGJ7 313 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 OR5D18Q8NGL1 313 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 OR13C5Q8NGS8 318 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 TNFAIP8L1Q8WVP5 186 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 RGP1Q92546 391 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-206ENST00000462613 SLAMF9Q96A28 289 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 RFT1Q96AA3 541 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 SPACA5Q96QH8 159 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM246Q9BRR3 403 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 UQCC2Q9BRT2 126 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 SSBP3Q9BWW4 388 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-206ENST00000462613 METTL9Q9H1A3 318 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 METTL17Q9H7H0 456 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-206ENST00000462613 PPP1R3EQ9H7J1 279 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF696Q9H7X3 374 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM165Q9HC07 324 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 SNTG1Q9NSN8 517 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 NDUFB11Q9NX14 153 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 OR14J1Q9UGF5 321 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 STUB1Q9UNE7 303 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 KIAA2026Q5HYC2 2103 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 IGHV3OR15-7A0A075B7D8 119 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 TRBV5-7A0A0A0MS05 114 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 A0A0G2JMP0 313 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 A0A0X1KG70 313 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 TRDV1A0A1B0GX56 115 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 A0A1W2PPH5 198 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 FUOMA2VDF0 154 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 MAGEA13PA6NCF6 341 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 A8MV72 311 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 SH2D1BO14796 132 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 SPRY1O43609 319 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ENSAO43768 121 aaKnown RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 KDM4BO94953 1096 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 INMTO95050 263 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 HTR3BO95264 441 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ECDO95905 644 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 KNG1P01042 644 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 UCHL1P09936 223 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 UBBP0CG47 229 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 CD36P16671 472 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF16P17020 682 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 IGFBP3P17936 291 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 EGR1P18146 543 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 SRMP19623 302 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 CALRP27797 417 aaKnown RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 PTGFRP43088 359 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 MTNR1BP49286 362 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 DVL1P1P54792 670 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 RPS11P62280 158 aaKnown RBP eCLIP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 RPS25P62851 125 aaKnown RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 SCGB2A2Q13296 93 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 FAM189A2Q15884 450 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 FAM201AQ5SY85 155 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 SYT6Q5T7P8 510 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 DCAF12L2Q5VW00 463 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF529Q6P280 563 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 UNQ9370/PRO34162Q6UXP9 181 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ACP7Q6ZNF0 438 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 CIARTQ8N365 385 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF561Q8N587 486 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ASCC1Q8N9N2 400 aaKnown RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 C19orf18Q8NEA5 215 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM185AQ8NFB2 350 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 OR4M2Q8NGB6 313 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 OR52N4Q8NGI2 321 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 OR5D13Q8NGL4 314 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM186Q96B77 213 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms