RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	SPACA5	Q96QH8	159 aa		11.17	□□□□□ -0.62
GARNL3-208	ENST00000444677	DCTN5	Q9BTE1	182 aa		11.17	□□□□□ -0.62
GARNL3-208	ENST00000444677	C19orf24	Q9BVV8	132 aa		11.17	□□□□□ -0.62
GARNL3-208	ENST00000444677	SIRPD	Q9H106	197 aa		11.17	□□□□□ -0.62
GARNL3-208	ENST00000444677	CNTD2	Q9H8S5	307 aa		11.17	□□□□□ -0.62
GARNL3-208	ENST00000444677	DIMT1	Q9UNQ2	313 aa	Known RBP	11.17	□□□□□ -0.62
GARNL3-208	ENST00000444677	MDFIC2	A0A1B0GVS7	189 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	NKX6-3	A6NJ46	265 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	TOX4	O94842	621 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	NXPH2	O95156	264 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	ECD	O95905	644 aa	Predicted RBP	11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	PPIAL4G	P0DN37	164 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	NDUFB7	P17568	137 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	AZGP1	P25311	298 aa	Known RBP	11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	PRDX2	P32119	198 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	POU3F4	P49335	361 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	AQP4	P55087	323 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	IL24	Q13007	206 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	TUSC1	Q2TAM9	212 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	LRRC10	Q5BKY1	277 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	RUSC1-AS1	Q66K80	236 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	CRIP3	Q6Q6R5	217 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	SLC25A26	Q70HW3	274 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	UTS2B	Q765I0	119 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	PDZD9	Q8IXQ8	264 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	ZDHHC22	Q8N966	263 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	TMEM185A	Q8NFB2	350 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	OR5AK2	Q8NH90	309 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	GATAD2B	Q8WXI9	593 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	PP6455	Q8WZ26	134 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	C10orf35	Q96D05	121 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	SDSL	Q96GA7	329 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	MED30	Q96HR3	178 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	WDFY2	Q96P53	400 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	PKIB	Q9C010	78 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	DNTTIP1	Q9H147	329 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	HES4	Q9HCC6	221 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	RASL12	Q9NYN1	266 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	IL36RN	Q9UBH0	155 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	OR14J1	Q9UGF5	321 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	CAB39	Q9Y376	341 aa	Predicted RBP	11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	HSPE1-MOB4	S4R3N1	261 aa		11.16	□□□□□ -0.62
GARNL3-208	ENST00000444677	TRBV2	A0A0J9YWF9	115 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	CENPVL3	A0A0U1RRI6	287 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	SPRY1	O43609	319 aa	Predicted RBP	11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	FPR2	P25090	351 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	NPBWR2	P48146	333 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	SOX2	P48431	317 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	ATP1B3	P54709	279 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	MTCP1	P56278	107 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	HILS1	P60008	231 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	ST3GAL4	Q11206	333 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	CDK5R1	Q15078	307 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	CNN3	Q15417	329 aa	Known RBP	11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	EGFL6	Q8IUX8	553 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	ZFP41	Q8N8Y5	198 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	PNLDC1	Q8NA58	520 aa	Known RBP	11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	ZNF485	Q8NCK3	441 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	OR13C5	Q8NGS8	318 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	ORAI1	Q96D31	301 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	CEP19	Q96LK0	163 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	DUX5	Q96PT3	197 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	SUCNR1	Q9BXA5	334 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	BABAM2	Q9NXR7	383 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	ONECUT1	Q9UBC0	465 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	PSORS1C1	Q9UIG5	152 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	POLDIP2	Q9Y2S7	368 aa		11.15	□□□□□ -0.62
GARNL3-208	ENST00000444677	IGKV1-12	A0A0C4DH73	117 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	TMEM212	A6NML5	194 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	OGG1	O15527	345 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	ANGPTL7	O43827	346 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	IGKV1D-12	P01611	117 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	LIPF	P07098	398 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	CCDC159	P0C7I6	412 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	BCL3	P20749	454 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	C21orf33	P30042	268 aa	Predicted RBP	11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	RBP2	P50120	134 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	CAPZA1	P52907	286 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	MRPL28	Q13084	256 aa	Known RBP	11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	SCGB2A2	Q13296	93 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	SMIM21	Q3B7S5	101 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	ASPHD2	Q6ICH7	369 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	RPL22L1	Q6P5R6	122 aa	Known RBP	11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	TMPRSS11A	Q6ZMR5	421 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	USP43	Q70EL4	1123 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	AHSA2	Q719I0	299 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677		Q8N7P7	452 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	DNAAF1	Q8NEP3	725 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	OR5D18	Q8NGL1	313 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	RPS4Y2	Q8TD47	263 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	SGCD	Q92629	289 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	LHX4	Q969G2	390 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	C1orf147	Q96MC9	270 aa	Predicted RBP	11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	MYCBP	Q99417	103 aa	Predicted RBP	11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	NKX3-1	Q99801	234 aa	Predicted RBP	11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	COMMD4	Q9H0A8	199 aa		11.14	□□□□□ -0.63

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