RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 LOXL2Q9Y4K0 774 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 UMAD1C9J7I0 102 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 K7EPK0 472 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 OR8U9P0C7N5 309 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 H2BFSP57053 126 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 HIST2H3PS2Q5TEC6 136 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 FAM71E2Q8N5Q1 922 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 NELFAQ9H3P2 528 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 IGHV3-64DA0A0J9YX35 117 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 LOC102725191A0A1B0GVB3 256 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 CBY3A6NI87 242 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 ZNF729A6NN14 1252 aaPredicted RBP9.29□□□□□ -0.92
CALD1-203ENST00000393118 ZNHIT1O43257 154 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 CLN5O75503 358 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 FBP1P09467 338 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 PAX6P26367 422 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 SSBP1Q04837 148 aaKnown RBP9.29□□□□□ -0.92
CALD1-203ENST00000393118 ZNF774Q6NX45 483 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 ZNF2Q9BSG1 426 aaPredicted RBP9.29□□□□□ -0.92
CALD1-203ENST00000393118 KIAA1549LQ6ZVL6 1849 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 DOCK7Q96N67 2140 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 SLC31A2O15432 143 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 HIST1H1DP16402 221 aaKnown RBP9.29□□□□□ -0.92
CALD1-203ENST00000393118 PSMB6P28072 239 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 CLDN15P56746 228 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 STARD6P59095 220 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 PJVKQ0ZLH3 352 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 ZNF684Q5T5D7 378 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 Q6ZRG5 221 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 C6orf201Q7Z4U5 140 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 VASH2Q86V25 355 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 OR9K2Q8NGE7 335 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 REEP6Q96HR9 211 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 ATG101Q9BSB4 218 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 GGACTQ9BVM4 153 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 MFRPQ9BY79 579 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 CNTNAP3Q9BZ76 1288 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 G6PC2Q9NQR9 355 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 MCTS1Q9ULC4 181 aaKnown RBP9.29□□□□□ -0.92
CALD1-203ENST00000393118 KLK2P20151 261 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 FKBP2P26885 142 aaKnown RBP9.29□□□□□ -0.92
CALD1-203ENST00000393118 C6orf15Q6UXA7 325 aaPredicted RBP9.29□□□□□ -0.92
CALD1-203ENST00000393118 LRP11Q86VZ4 500 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 UBALD2Q8IYN6 164 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 SECTM1Q8WVN6 248 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 ARRDC1-AS1Q9H2J1 176 aa9.29□□□□□ -0.92
CALD1-203ENST00000393118 CDC14BO60729 498 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 ADAP1O75689 374 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 CHATP28329 748 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 HOXC12P31275 282 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 CAV2P51636 162 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 C2orf68Q2NKX9 166 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 TEX30Q5JUR7 227 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 OR2T2Q6IF00 324 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 LPCAT3Q6P1A2 487 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 SGCZQ96LD1 299 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 UTP23Q9BRU9 249 aaKnown RBP9.28□□□□□ -0.92
CALD1-203ENST00000393118 TMPRSS13Q9BYE2 586 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 CHRNA10Q9GZZ6 450 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 DMRT1Q9Y5R6 373 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 LHFPL6Q9Y693 200 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 TGOLN2O43493 480 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 TNFSF12O43508 249 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 TAGLN2P37802 199 aaKnown RBP9.28□□□□□ -0.92
CALD1-203ENST00000393118 PCBD1P61457 104 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 ARF1P84077 181 aaKnown RBP9.28□□□□□ -0.92
CALD1-203ENST00000393118 ECH1Q13011 328 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 C15orf54Q8N8G6 183 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 SAP25Q8TEE9 199 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 IL1F10Q8WWZ1 152 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 SLC39A7Q92504 469 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 C12orf49Q9H741 205 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 BCO1Q9HAY6 547 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 IL17BQ9UHF5 180 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 KCNK7Q9Y2U2 307 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 BORCS7-ASMTA0A0B4J1R7 106 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 C9orf170A2RU37 121 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 FTCDNL1E5RQL4 147 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 DIRAS3O95661 229 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
CALD1-203ENST00000393118 GLRA1P23415 457 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 ZP4Q12836 540 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 PPA1Q15181 289 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 AWAT1Q58HT5 328 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 C11orf87Q6NUJ2 197 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 ARHGEF39Q8N4T4 335 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 ADAD2Q8NCV1 583 aaKnown RBP9.28□□□□□ -0.92
CALD1-203ENST00000393118 TREM2Q9NZC2 230 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 THADAQ6YHU6 1953 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 PTPRSQ13332 1948 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 A0A1W2PPE2 198 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 NPIPB7O75200 414 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 ZNF32P17041 273 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 RAB5AP20339 215 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 RAB4BP61018 213 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 OR2Y1Q8NGV0 311 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 OR51F2Q8NH61 342 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 SLC25A28Q96A46 364 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 SYT3Q9BQG1 590 aa9.28□□□□□ -0.92
CALD1-203ENST00000393118 P4HTMQ9NXG6 502 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms