RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 OR2AE1Q8NHA4 323 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 CLDN23Q96B33 292 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 GALNT14Q96FL9 552 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 SRXN1Q9BYN0 137 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 NXT1Q9UKK6 140 aaKnown RBP11.09□□□□□ -0.63
CTPS1-202ENST00000372621 POMT1Q9Y6A1 747 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
CTPS1-202ENST00000372621 FARS2O95363 451 aaKnown RBP11.09□□□□□ -0.63
CTPS1-202ENST00000372621 CHATP28329 748 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 F2RL1P55085 397 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 TMEM187Q14656 261 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 RAB35Q15286 201 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 TAF9Q16594 264 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 CPNE2Q96FN4 548 aaPredicted RBP11.09□□□□□ -0.63
CTPS1-202ENST00000372621 WNT16Q9UBV4 365 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 IFNA21P01568 189 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 NTF4P34130 210 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 ID4P47928 161 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 PIGPP57054 158 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 RAC1P63000 192 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 GPR137CQ8N3F9 429 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 LRTM2Q8N967 370 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 GLYATL2Q8WU03 294 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 REEP6Q96HR9 211 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 SULT4A1Q9BR01 284 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 NECAP2Q9NVZ3 263 aa11.09□□□□□ -0.63
CTPS1-202ENST00000372621 TNRC6BQ9UPQ9 1833 aaKnown RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 SDK2Q58EX2 2172 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 TNFSF11O14788 317 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 MBPP02686 304 aaPredicted RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 DVL1P1P54792 670 aaPredicted RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 TMEM42Q69YG0 159 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 RXFP4Q8TDU9 374 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 ERGIC1Q969X5 290 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 MARS2Q96GW9 593 aaKnown RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 ESRP2Q9H6T0 727 aaKnown RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 PLEKHA2Q9HB19 425 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 SGCEO43556 437 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 KLF7O75840 302 aaPredicted RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 PDZK1IP1Q13113 114 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 RSU1Q15404 277 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 EXT1Q16394 746 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 Q6ZRG5 221 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 M1APQ8TC57 530 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 SF3B5Q9BWJ5 86 aaKnown RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 NAA60Q9H7X0 242 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 LSM5Q9Y4Y9 91 aaKnown RBP11.08□□□□□ -0.64
CTPS1-202ENST00000372621 NCKAP5O14513 1909 aa11.08□□□□□ -0.64
CTPS1-202ENST00000372621 IGKV1-12A0A0C4DH73 117 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 G3V3Y1 287 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 IGKV1D-12P01611 117 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CRYBA1P05813 215 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 OR8U9P0C7N5 309 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CXCL12P48061 93 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 IL11RAQ14626 422 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 ZNF774Q6NX45 483 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 OR8U1Q8NH10 309 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CMSS1Q9BQ75 279 aaKnown RBP11.07□□□□□ -0.64
CTPS1-202ENST00000372621 DKKL1Q9UK85 242 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 STARD10Q9Y365 291 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 HS3ST3B1Q9Y662 390 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 FAM230AA0A1W2PPH8 454 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 OR6C6A6NF89 314 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 COLCA2A8K830 154 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CST2P09228 141 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 OR5AC1P0C628 307 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CD80P33681 288 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 OPRM1P35372 400 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 SSR4P51571 173 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 UCP2P55851 309 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 B3GALT5-AS1P59052 145 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CNN3Q15417 329 aaKnown RBP11.07□□□□□ -0.64
CTPS1-202ENST00000372621 SKA3Q8IX90 412 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 OR1F12Q8NHA8 337 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
CTPS1-202ENST00000372621 KIRREL1Q96J84 757 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 SCRT1Q9BWW7 348 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 FSCN3Q9NQT6 498 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CACFD1Q9UGQ2 172 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 E5RGE8 158 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 ZNF728P0DKX0 622 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 PAX6P26367 422 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 RBP2P50120 134 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 CHAF1BQ13112 559 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 SP6Q3SY56 376 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 OR10AD1Q8NGE0 317 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 RNF122Q9H9V4 155 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 NSG2Q9Y328 171 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 TIMM10BQ9Y5J6 103 aa11.07□□□□□ -0.64
CTPS1-202ENST00000372621 DMDP11532 3685 aa11.06□□□□□ -0.64
CTPS1-202ENST00000372621 ZNF850A8MQ14 1090 aa11.06□□□□□ -0.64
CTPS1-202ENST00000372621 H7C1Q1 480 aa11.06□□□□□ -0.64
CTPS1-202ENST00000372621 MASP2O00187 686 aa11.06□□□□□ -0.64
CTPS1-202ENST00000372621 AGPAT2O15120 278 aa11.06□□□□□ -0.64
CTPS1-202ENST00000372621 DNPH1O43598 174 aa11.06□□□□□ -0.64
CTPS1-202ENST00000372621 CBR3O75828 277 aa11.06□□□□□ -0.64
CTPS1-202ENST00000372621 ZNF205O95201 554 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms