RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CEACAM1P13688 526 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 ATP5J2P56134 94 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 APH1BQ8WW43 257 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 IGLV3-19P01714 112 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 GABRB1P18505 474 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 PPT1P50897 306 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 KLRB1Q12918 225 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 ST3GAL2Q16842 350 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 FBXW9Q5XUX1 488 aa10.23□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF883P0CG24 379 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 MAGEB1P43366 347 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 DMKNQ6E0U4 476 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 MRGPRDQ8TDS7 321 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 RNF141Q8WVD5 230 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 GMPPAQ96IJ6 420 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 MTCH1Q9NZJ7 389 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 RTTNQ86VV8 2226 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 TO15178 435 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 SNRPNP63162 240 aaKnown RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 TMEM251Q8N6I4 163 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 FDCSPQ8NFU4 85 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 LINC01560Q8TB33 94 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 LIN37Q96GY3 246 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 AKIP1Q9NQ31 210 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 RPS10P5Q9NQ39 176 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 FLVCR2Q9UPI3 526 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 PUS1Q9Y606 427 aaKnown RBP eCLIP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 GPR6P46095 362 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 CLDN20P56880 219 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 FOXB2Q5VYV0 432 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 MALSU1Q96EH3 234 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 MISP3Q96FF7 219 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 PSG11Q9UQ72 335 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 IFI6P09912 130 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 OR4E1P0C645 316 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 HIST1H1DP16402 221 aaKnown RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 UBE2MP61081 183 aaKnown RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 DHODHQ02127 395 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 PLPPR5Q32ZL2 321 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 CCDC190Q86UF4 302 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 PDCD6O75340 191 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 THBS3P49746 956 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 HLXQ14774 488 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 ZXDCQ2QGD7 858 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-204ENST00000367248 NCOR1O75376 2440 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 C4orf51C9J302 202 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 GPR31O00270 319 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 HTN1P15515 57 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 CRYBB2P43320 205 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 INSL4Q14641 139 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 ABHD17AQ96GS6 310 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 LRFN3Q9BTN0 628 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 TMEM208Q9BTX3 173 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 ARV1Q9H2C2 271 aa10.22□□□□□ -0.77
SYNE1-204ENST00000367248 EXOSC2Q13868 293 aaKnown RBP10.21□□□□□ -0.77
SYNE1-204ENST00000367248 OR8B12Q8NGG6 310 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 RNF133Q8WVZ7 376 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 SPSB2Q99619 263 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 OR2H1Q9GZK4 316 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 DNASE2O00115 360 aaPredicted RBP10.21□□□□□ -0.77
SYNE1-204ENST00000367248 TSPAN2O60636 221 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 HPNP05981 417 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 ADRA2AP08913 450 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 PIGPP57054 158 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 SCAND1P57086 179 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 MFSD4AQ8N468 514 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF385AQ96PM9 386 aaKnown RBP10.21□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF785A8K8V0 405 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 C9orf172C9J069 976 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 DBPQ10586 325 aaPredicted RBP10.21□□□□□ -0.77
SYNE1-204ENST00000367248 BAK1Q16611 211 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 TMEM229BQ8NBD8 167 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 ARHGAP5-AS1Q96IT6 56 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 TMEM38BQ9NVV0 291 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 POMT1Q9Y6A1 747 aa10.21□□□□□ -0.77
SYNE1-204ENST00000367248 DLEC1Q9Y238 1755 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 IGHV3OR16-10A0A075B7F0 116 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 A0A1B0GUH1 482 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 LRP3O75074 770 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 OR4S1Q8NGB4 309 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 CTSBP07858 339 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 SMIM10L1P0DMW3 83 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 PAX6P26367 422 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 MMP15P51511 669 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 OR52N4Q8NGI2 321 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 SMIM10Q96HG1 83 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 MAGT1Q9H0U3 335 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 CISD1Q9NZ45 108 aaKnown RBP10.21□□□□□ -0.78
SYNE1-204ENST00000367248 SNRNP70P08621 437 aaKnown RBP10.21□□□□□ -0.78
SYNE1-204ENST00000367248 PSMB6P28072 239 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 CEACAM6P40199 344 aa10.21□□□□□ -0.78
SYNE1-204ENST00000367248 SSX4O60224 188 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 PTHLHP12272 177 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CSN1S1P47710 185 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 SPINK9Q5DT21 86 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CREB3L2Q70SY1 520 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CADM3Q8N126 398 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 PERPQ96FX8 193 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 GPA33Q99795 319 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms