RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 AKR1E2Q96JD6 320 aa21.36■■□□□ 1.01
CPNE1-202ENST00000352393 EGLN1Q9GZT9 426 aa21.36■■□□□ 1.01
CPNE1-202ENST00000352393 E5RGE8 158 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 ANGPTL7O43827 346 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 CCL7P80098 99 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 C15orf54Q8N8G6 183 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 SFT2D1Q8WV19 159 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 BSCL2Q96G97 398 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-202ENST00000352393 ULBP2Q9BZM5 246 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 AKIRIN1Q9H9L7 192 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-202ENST00000352393 NSG2Q9Y328 171 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 ARID1AO14497 2285 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 IGKV1-27A0A075B6S5 117 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 LY6G6EA0A0G2JKS1 128 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 CELA2AP08217 269 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 ZNF728P0DKX0 622 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 HABP2Q14520 560 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-202ENST00000352393 TAF9Q16594 264 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 MAML2Q8IZL2 1156 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-202ENST00000352393 ZIC4Q8N9L1 334 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 SECTM1Q8WVN6 248 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 CCDC74BQ96LY2 380 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 FAM212BQ9NTI7 297 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-202ENST00000352393 MRPS17Q9Y2R5 130 aaKnown RBP21.35■■□□□ 1.01
CPNE1-202ENST00000352393 U3KQA8 63 aa21.35■■□□□ 1.01
CPNE1-202ENST00000352393 SPRY1O43609 319 aaPredicted RBP21.34■■□□□ 1.01
CPNE1-202ENST00000352393 OR5AC1P0C628 307 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 CHATP28329 748 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 RRADP55042 308 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 UCP2P55851 309 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 MRPS34P82930 218 aaKnown RBP21.34■■□□□ 1.01
CPNE1-202ENST00000352393 HGFACQ04756 655 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 RSU1Q15404 277 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 HMGN3Q15651 99 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 FAM27BQ5VT28 67 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 ETV3LQ6ZN32 361 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 LRTM2Q8N967 370 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 OR2AE1Q8NHA4 323 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 TOMM40LQ969M1 308 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 NAA11Q9BSU3 229 aaPredicted RBP21.34■■□□□ 1.01
CPNE1-202ENST00000352393 TERTO14746 1132 aaKnown RBP21.34■■□□□ 1.01
CPNE1-202ENST00000352393 LIFP15018 202 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 OPRM1P35372 400 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 RAB35Q15286 201 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 RAET1LQ5VY80 246 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 PPP1R3BQ86XI6 285 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 INTS12Q96CB8 462 aaKnown RBP21.34■■□□□ 1.01
CPNE1-202ENST00000352393 ZNF837Q96EG3 531 aaPredicted RBP21.34■■□□□ 1.01
CPNE1-202ENST00000352393 SCRT1Q9BWW7 348 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 KCNIP3Q9Y2W7 256 aa21.34■■□□□ 1.01
CPNE1-202ENST00000352393 H7C1Q1 480 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 SEC11BP0C7V7 166 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 MEOX2P50222 304 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 SP6Q3SY56 376 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 ASCL4Q6XD76 172 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 C20orf196Q8IYI0 205 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 COMMD1Q8N668 190 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 RTN4IP1Q8WWV3 396 aaPredicted RBP21.33■■□□□ 1.01
CPNE1-202ENST00000352393 MARS2Q96GW9 593 aaKnown RBP21.33■■□□□ 1.01
CPNE1-202ENST00000352393 ANGPTL4Q9BY76 406 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 PROK2Q9HC23 129 aa21.33■■□□□ 1.01
CPNE1-202ENST00000352393 LOC102723996A0A087X1L8 192 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 ZNF850A8MQ14 1090 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 TSPAN15O95858 294 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 DANCRP0C864 163 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 CCL3P10147 92 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 SNCAP37840 140 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 PPT1P50897 306 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 CHAF1BQ13112 559 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 MIDNQ504T8 468 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 REEP6Q96HR9 211 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 C18orf12Q96KH6 178 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 CLCC1Q96S66 551 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 GINS3Q9BRX5 216 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 SUCNR1Q9BXA5 334 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 WFDC1Q9HC57 220 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 FAM230AA0A1W2PPH8 454 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 MASP2O00187 686 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 GPR137BO60478 399 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 ZIC3O60481 467 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 DSCR4P56555 118 aaPredicted RBP21.32■■□□□ 1
CPNE1-202ENST00000352393 B2MP61769 119 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 CNN3Q15417 329 aaKnown RBP21.32■■□□□ 1
CPNE1-202ENST00000352393 ABCA11PQ4W5N1 156 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 CLEC9AQ6UXN8 241 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 NTNG2Q96CW9 530 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 C14orf79Q96F83 325 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 GNRHR2Q96P88 292 aa21.32■■□□□ 1
CPNE1-202ENST00000352393 PARP12Q9H0J9 701 aaKnown RBP21.32■■□□□ 1
CPNE1-202ENST00000352393 SYNGR3O43761 229 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 P2RY1P47900 373 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 RAB5BP61020 215 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 KDF1Q8NAX2 398 aaPredicted RBP21.31■■□□□ 1
CPNE1-202ENST00000352393 HIST1H2BAQ96A08 127 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 ZDHHC8Q9ULC8 765 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 CACNA1EQ15878 2313 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 SGCEO43556 437 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 ZNF205O95201 554 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 IGFBP4P22692 258 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 EPHA8P29322 1005 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms