RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 LMO4P61968 165 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 PDZK1IP1Q13113 114 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 ESCO2Q56NI9 601 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 TEX36Q5VZQ5 186 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 ZNF529Q6P280 563 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 SLC25A26Q70HW3 274 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 SLC36A1Q7Z2H8 476 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 CDH26Q8IXH8 852 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 SAXO1Q8IYX7 474 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 LINC01356Q8N9X3 169 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 ZSCAN4Q8NAM6 433 aaPredicted RBP9.92□□□□□ -0.82
SNCA-202ENST00000345009 POC1AQ8NBT0 407 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 MAPK1IP1LQ8NDC0 245 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 OR8B3Q8NGG8 313 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 OR13C5Q8NGS8 318 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 OR51F2Q8NH61 342 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 DERL3Q96Q80 235 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 OR8B2Q96RD0 313 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 TMEM246Q9BRR3 403 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 FGF23Q9GZV9 251 aaPredicted RBP9.92□□□□□ -0.82
SNCA-202ENST00000345009 DNTTIP1Q9H147 329 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 METTL17Q9H7H0 456 aaPredicted RBP9.92□□□□□ -0.82
SNCA-202ENST00000345009 ZNF696Q9H7X3 374 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 PATZ1Q9HBE1 687 aaKnown RBP9.92□□□□□ -0.82
SNCA-202ENST00000345009 NOX4Q9NPH5 578 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 GLS2Q9UI32 602 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 TANC2Q9HCD6 1990 aa9.92□□□□□ -0.82
SNCA-202ENST00000345009 A0A096LNT2 108 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 A0A1W2PPK0 400 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 NKX6-3A6NJ46 265 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 CEACAM18A8MTB9 384 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 FOXH1O75593 365 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 RHBDL1O75783 438 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 PLATP00750 562 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 IGHV2-5P01817 119 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 SRMP19623 302 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 GALP22466 123 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 CD80P33681 288 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 ZNF93P35789 620 aaPredicted RBP9.91□□□□□ -0.82
SNCA-202ENST00000345009 NPY4RP50391 375 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 BMXP51813 675 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 GMFBP60983 142 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 NEDD8Q15843 81 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 HSD17B12Q53GQ0 312 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 FAM201AQ5SY85 155 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 UNQ9370/PRO34162Q6UXP9 181 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 CALHM1Q8IU99 346 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 NKAIN3Q8N8D7 197 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 FOXRED1Q96CU9 486 aaPredicted RBP9.91□□□□□ -0.82
SNCA-202ENST00000345009 NEIL1Q96FI4 390 aaPredicted RBP9.91□□□□□ -0.82
SNCA-202ENST00000345009 MED30Q96HR3 178 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 CEP19Q96LK0 163 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 NRIP2Q9BQI9 281 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 NDUFB11Q9NX14 153 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 NLKQ9UBE8 527 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNCA-202ENST00000345009 TEP1Q99973 2627 aaKnown RBP9.91□□□□□ -0.82
SNCA-202ENST00000345009 WNK2Q9Y3S1 2297 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 MALRD1Q5VYJ5 2156 aa9.91□□□□□ -0.82
SNCA-202ENST00000345009 IGKV1-27A0A075B6S5 117 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 OR2AT4A6NND4 320 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 WNT9BO14905 357 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 TMPRSS2O15393 492 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 ADAM20O43506 726 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 SYNGR1O43759 233 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 TGFAP01135 160 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 WNT2P09544 360 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 IGFBP3P17936 291 aaPredicted RBP9.9□□□□□ -0.82
SNCA-202ENST00000345009 PSMD7P51665 324 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 GNB2P62879 340 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 DDI2Q5TDH0 399 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 CD276Q5ZPR3 534 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 FAM166AQ6J272 317 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 CLEC9AQ6UXN8 241 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 C19orf18Q8NEA5 215 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 OR52N4Q8NGI2 321 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 SPACA5Q96QH8 159 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 ELL3Q9HB65 397 aaPredicted RBP9.9□□□□□ -0.82
SNCA-202ENST00000345009 SNTG1Q9NSN8 517 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 CLN8Q9UBY8 286 aa9.9□□□□□ -0.82
SNCA-202ENST00000345009 DOCK11Q5JSL3 2073 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 IGHV3OR15-7A0A075B7D8 119 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 TRAV20A0A0B4J274 112 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 NDUFB3O43676 98 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 CD5LO43866 347 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 ZNF780AO75290 641 aaPredicted RBP9.89□□□□□ -0.83
SNCA-202ENST00000345009 INMTO95050 263 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 KNG1P01042 644 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 GYPAP02724 150 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 MAS1P04201 325 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 MSMBP08118 114 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 UCHL1P09936 223 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 IGHV4-31P0DP07 118 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 EGR1P18146 543 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 GATA3P23771 443 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 PTGFRP43088 359 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 GABRA2P47869 451 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 PITPNBP48739 271 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 RPS25P62851 125 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms