RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 EIF4E3Q8N5X7 224 aaKnown RBP14.18□□□□□ -0.14
LITAF-201ENST00000339430 SCNM1Q9BWG6 230 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 ACKR4Q9NPB9 350 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 DEPPQ9NTK1 212 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 RYDENQ9NUL5 291 aaKnown RBP14.18□□□□□ -0.14
LITAF-201ENST00000339430 TMEM38BQ9NVV0 291 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 LRFN1Q9P244 771 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 A0A1B0GW55 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 MSGN1A6NI15 193 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 ZNF716A6NP11 495 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 SERPINE3A8MV23 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 DUX4L2P0CJ85 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 DUX4L3P0CJ86 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 DUX4L4P0CJ87 422 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 DUX4L5P0CJ88 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 DUX4L6P0CJ89 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 DUX4L7P0CJ90 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 HTR5AP47898 357 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 ATRAIDQ6UW56 229 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 OR10D3Q8NH80 312 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 OR1F12Q8NHA8 337 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 FGFBP3Q8TAT2 258 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 SCGB3A2Q96PL1 93 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 FAAP24Q9BTP7 215 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 SF3B5Q9BWJ5 86 aaKnown RBP14.17□□□□□ -0.14
LITAF-201ENST00000339430 RAB18Q9NP72 206 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 PLA2G3Q9NZ20 509 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 GSKIPQ9P0R6 139 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 DUX4Q9UBX2 424 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 PINLYPA6NC86 204 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 LRRC3CA6NJW4 275 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 ZNF205O95201 554 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 IGHV3-9P01782 118 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 CSTBP04080 98 aaKnown RBP14.17□□□□□ -0.14
LITAF-201ENST00000339430 ATF4P18848 351 aaPredicted RBP14.17□□□□□ -0.14
LITAF-201ENST00000339430 RRADP55042 308 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 CYCSP99999 105 aaKnown RBP14.17□□□□□ -0.14
LITAF-201ENST00000339430 RSU1Q15404 277 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 BRICD5Q6PL45 260 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 PLXDC2Q6UX71 529 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 FOXRED2Q8IWF2 684 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 OR51F2Q8NH61 342 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 PIK3IP1Q96FE7 263 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 NARS2Q96I59 477 aaKnown RBP14.17□□□□□ -0.14
LITAF-201ENST00000339430 ZNF845Q96IR2 970 aaPredicted RBP14.17□□□□□ -0.14
LITAF-201ENST00000339430 Q96M66 194 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 ZNF2Q9BSG1 426 aaPredicted RBP14.17□□□□□ -0.14
LITAF-201ENST00000339430 ASF1BQ9NVP2 202 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 ABI3Q9P2A4 366 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 CEP295Q9C0D2 2601 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 SPTBN4Q9H254 2564 aa14.17□□□□□ -0.14
LITAF-201ENST00000339430 MSTNO14793 375 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 RPS2P15880 293 aaKnown RBP14.16□□□□□ -0.14
LITAF-201ENST00000339430 CLDN15P56746 228 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 CEACAM16Q2WEN9 425 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 Q6ZSR3 168 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 DYRK2Q92630 601 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 PHYHIPLQ96FC7 376 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 SIGLEC12Q96PQ1 595 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 FIGNL2A6NMB9 653 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 ZNHIT1O43257 154 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 CST2P09228 141 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 GDF1P27539 372 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 PTGER4P35408 488 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 RFC3P40938 356 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 PSG4Q00888 419 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 RAB32Q13637 225 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 RPUSD3Q6P087 351 aaKnown RBP14.16□□□□□ -0.14
LITAF-201ENST00000339430 TMEM200AQ86VY9 491 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 BPIFCQ8NFQ6 507 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 OR1S2Q8NGQ3 325 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 ABHD3Q8WU67 409 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 KCNE4Q8WWG9 221 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 EMG1Q92979 244 aaKnown RBP14.16□□□□□ -0.14
LITAF-201ENST00000339430 C10orf35Q96D05 121 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 METTL9Q9H1A3 318 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 PCDHB10Q9UN67 800 aa14.16□□□□□ -0.14
LITAF-201ENST00000339430 LOC400499M0QZD8 3231 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 TEX13DA0A0J9YY54 714 aaPredicted RBP14.15□□□□□ -0.14
LITAF-201ENST00000339430 NEURL1O76050 574 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 SFTPBP07988 381 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 OPRM1P35372 400 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 S100A10P60903 97 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 TAGLNQ01995 201 aaKnown RBP14.15□□□□□ -0.14
LITAF-201ENST00000339430 C14orf166Q9Y224 244 aaKnown RBP14.15□□□□□ -0.14
LITAF-201ENST00000339430 CFAP47Q6ZTR5 3102 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 AKR1C2P52895 323 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 DEFA5Q01523 94 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 AKR1C1Q04828 323 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 SCRN3Q0VDG4 424 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 FREM1Q5H8C1 2179 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 SULF2Q8IWU5 870 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 BATF2Q8N1L9 274 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 SPERTQ8NA61 448 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 OR2V1Q8NHB1 315 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 CPT1CQ8TCG5 803 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 FOXB1Q99853 325 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 AK3Q9UIJ7 227 aa14.15□□□□□ -0.14
LITAF-201ENST00000339430 TRBV6-7A0A0A0MS04 114 aa14.14□□□□□ -0.15
LITAF-201ENST00000339430 FAM221AA4D161 298 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms