RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GLIPR1L1Q6UWM5 242 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 TMEM105Q8N8V8 129 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 SEMA6DQ8NFY4 1073 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 RHBDD1Q8TEB9 315 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 MAFIPQ8WZ33 124 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 THRSPQ92748 146 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 SCRT1Q9BWW7 348 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 GVINP1Q7Z2Y8 2422 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 PMELP40967 661 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 FOLR3P41439 243 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 RAB2AP61019 212 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 DEFA6Q01524 100 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 PCK2Q16822 640 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 OPN5Q6U736 354 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 PGAM5Q96HS1 289 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 C14orf144Q96I85 54 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 PISDQ9UG56 409 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 LYL1P12980 280 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 MPZP25189 248 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 SUPT4H1P63272 117 aaKnown RBP13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 CLEC9AQ6UXN8 241 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 UNQ6494/PRO21346Q6UXR6 183 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 HOGA1Q86XE5 327 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 ARRDC1Q8N5I2 433 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 RGCCQ9H4X1 137 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 KPTNQ9Y664 436 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 FREM1Q5H8C1 2179 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 A0A1W2PNV4 684 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 IFNA6P05013 189 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 ISG15P05161 165 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 S100A10P60903 97 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 SSTP61278 116 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 C1orf210Q8IVY1 113 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 OR14L1PQ8NHC6 308 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 IMMP1LQ96LU5 166 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 SMIM3Q9BZL3 60 aa13.61□□□□□ -0.23
SHROOM1-201ENST00000319854 AQP7P3A6NL99 342 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 CRTAPO75718 401 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 CD37P11049 281 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 FHITP49789 147 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 SULT1A1P50225 295 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 CYCSP99999 105 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 Q3ZCU0 254 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 DTX1Q86Y01 620 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 LYPD6Q86Y78 171 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 SLC22A24Q8N4F4 322 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 GTF3AQ92664 365 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 SLC26A1Q9H2B4 701 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 TUBA4BQ9H853 241 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 A0A0J9YW62 118 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 MED19A0JLT2 244 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 SOCS1O15524 211 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 TLX3O43711 291 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 ZIC3O60481 467 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 RFPL3SP0C7P2 107 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 HKR1P10072 659 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 FAHP16930 419 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 FSTP19883 344 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 SLC35A1P78382 337 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 TMEM128Q5BJH2 165 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 DEGS2Q6QHC5 323 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 OR2Y1Q8NGV0 311 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 OR6X1Q8NH79 312 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 PARP11Q9NR21 331 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 PLEK2Q9NYT0 353 aa13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 MRPS28Q9Y2Q9 187 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-201ENST00000319854 NME2P1O60361 137 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 IFNA2P01563 188 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 ITGA3P26006 1051 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 TMEM268Q5VZI3 342 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 PIGTQ969N2 578 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 SGK3Q96BR1 496 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 RAB3CQ96E17 227 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 ALKBH3Q96Q83 286 aaPredicted RBP13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 PROK2Q9HC23 129 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 CXorf65A6NEN9 183 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 DKK1O94907 266 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 HOXB5P09067 269 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 LIFP15018 202 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 SLC25A47Q6Q0C1 308 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 BATF2Q8N1L9 274 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 FADS6Q8N9I5 356 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 PNLDC1Q8NA58 520 aaKnown RBP13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 OR2AE1Q8NHA4 323 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 SRXN1Q9BYN0 137 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 METTL8Q9H825 291 aaKnown RBP13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 STARD10Q9Y365 291 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 SVILO95425 2214 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 HOXA5P20719 270 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 CHAF1BQ13112 559 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 MIDNQ504T8 468 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 C9orf135Q5VTT2 229 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 OR4K15Q8NH41 348 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 MEGF10Q96KG7 1140 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 GPR132Q9UNW8 380 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 HDGFL3Q9Y3E1 203 aa13.59□□□□□ -0.23
SHROOM1-201ENST00000319854 FLVCR1Q9Y5Y0 555 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms