RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SRSF10O75494 262 aaKnown RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 CLDN1O95832 211 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 RPS2P15880 293 aaKnown RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF154Q13106 437 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 EDDM3AQ14507 147 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 PRSS45Q7RTY3 260 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF485Q8NCK3 441 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 PKIBQ9C010 78 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 HMG20AQ9NP66 347 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF701Q9NV72 531 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ETV7Q9Y603 341 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 NCOA6Q14686 2063 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 NOTCH2Q04721 2471 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 A0A1W2PQ09 198 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 HSPA12AO43301 675 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 CYB5R3P00387 301 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF57Q68EA5 555 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR10K2Q6IF99 312 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 UNQ9370/PRO34162Q6UXP9 181 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 CDH26Q8IXH8 852 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 FAM168AQ92567 244 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 RAB9BQ9NP90 201 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 IGSF10Q6WRI0 2623 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 PRF1P14222 555 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 AVPI1Q5T686 147 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 Q6ZTK2 550 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR5T2Q8NGG2 359 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 SLC25A46Q96AG3 418 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 SF3B6Q9Y3B4 125 aaKnown RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ARHGAP21Q5T5U3 1957 aa9.46□□□□□ -0.89
TNFAIP3-201ENST00000237289 IGLV3-9A0A075B6K5 115 aa9.46□□□□□ -0.89
TNFAIP3-201ENST00000237289 A0A1W2PPH5 198 aa9.46□□□□□ -0.89
TNFAIP3-201ENST00000237289 CHRM2P08172 466 aa9.46□□□□□ -0.89
TNFAIP3-201ENST00000237289 TGFBR1P36897 503 aa9.46□□□□□ -0.89
TNFAIP3-201ENST00000237289 RAB40AQ8WXH6 277 aa9.46□□□□□ -0.89
TNFAIP3-201ENST00000237289 RAB3CQ96E17 227 aa9.46□□□□□ -0.89
TNFAIP3-201ENST00000237289 PLCE1Q9P212 2302 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 LINC00854A0A1B0GVQ3 168 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 TMPRSS2O15393 492 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 SOD3P08294 240 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 CSF3P09919 207 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 CD80P33681 288 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 DTX3Q8N9I9 347 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 NINJ1Q92982 152 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 WIPF3A6NGB9 483 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 PIN1P1O15428 100 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 PAHP00439 452 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 IFNA6P05013 189 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 BCL3P20749 454 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 OR3A3P47888 321 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 CELF2-AS1Q8N7Q2 184 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 OR8B3Q8NGG8 313 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 S100ZQ8WXG8 99 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 ST8SIA4Q92187 359 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 MRPS24Q96EL2 167 aaKnown RBP9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 C14orf79Q96F83 325 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 MED30Q96HR3 178 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 OR8B2Q96RD0 313 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 CCDC59Q9P031 241 aaKnown RBP9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 NLKQ9UBE8 527 aa9.46□□□□□ -0.9
TNFAIP3-201ENST00000237289 hCG_1809904A0A1W2PP81 198 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 A0A1W2PPE2 198 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 A0A1W2PR64 198 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 A0A1W2PRV1 198 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 CENPXA8MT69 81 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 SYNGR1O43759 233 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 TMEM127O75204 238 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 RNF224P0DH78 156 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 CD200P41217 278 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 MMP15P51511 669 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 CNPY1Q3B7I2 92 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 ESCO2Q56NI9 601 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 GTF3AQ92664 365 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 RAB39BQ96DA2 213 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 ZNF488Q96MN9 340 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 IGHV3OR15-7A0A075B7D8 119 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 LGALS8O00214 317 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 LILRA1O75019 489 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 TMEM33P57088 247 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 RPS11P62280 158 aaKnown RBP eCLIP9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 DCTN2Q13561 401 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 MPPED2Q15777 294 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 TRAF4Q9BUZ4 470 aaPredicted RBP9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 TRAPPC2LQ9UL33 140 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 KRTAP27-1Q3LI81 207 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 UBE2NLQ5JXB2 153 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 CD200R1LQ6Q8B3 271 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 TBC1D15Q8TC07 691 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 CMSS1Q9BQ75 279 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 PTPN13Q12923 2485 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 A0A1B0GVG6 124 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 NDUFA2O43678 99 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 HPXP02790 462 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 ARPC4P59998 168 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 PXT1Q8NFP0 134 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 ZNF665Q9H7R5 613 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 PTTG2Q9NZH5 202 aa9.45□□□□□ -0.9
TNFAIP3-201ENST00000237289 ARID1AO14497 2285 aa9.44□□□□□ -0.9
TNFAIP3-201ENST00000237289 DOPEY1Q5JWR5 2465 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms