RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MRPL28Q13084 256 aaKnown RBP17.46■□□□□ 0.39
PNKP-209ENST00000596726 USP43Q70EL4 1123 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 BTN2A1Q7KYR7 527 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 ZNF418Q8TF45 676 aaPredicted RBP17.46■□□□□ 0.39
PNKP-209ENST00000596726 PP6455Q8WZ26 134 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 TMIGD2Q96BF3 282 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 ADAT3Q96EY9 351 aaPredicted RBP17.46■□□□□ 0.39
PNKP-209ENST00000596726 GAFA1Q96PS6 74 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 ZNF222Q9UK12 451 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 SLC7A11Q9UPY5 501 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 HSPE1-MOB4S4R3N1 261 aa17.46■□□□□ 0.39
PNKP-209ENST00000596726 OR2AT4A6NND4 320 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 E9PI62 339 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 VENTXO95231 258 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 SERPINA3P01011 423 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 ACAA1P09110 424 aaPredicted RBP17.45■□□□□ 0.38
PNKP-209ENST00000596726 PSG2P11465 335 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 DCKP27707 260 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 FGF12P61328 243 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 ACP7Q6ZNF0 438 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 CALHM1Q8IU99 346 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 PHC2Q8IXK0 858 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 LY6G5BQ8NDX9 201 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 OR10AC1Q8NH08 325 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 ST8SIA4Q92187 359 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 PKIBQ9C010 78 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 HHLA2Q9UM44 414 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 POLDIP2Q9Y2S7 368 aa17.45■□□□□ 0.38
PNKP-209ENST00000596726 IGKV1D-17A0A075B6S4 117 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 IGKV1-27A0A075B6S5 117 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 IRGMA1A4Y4 181 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 NKX6-3A6NJ46 265 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 GPR37O15354 613 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 SIGLEC5O15389 551 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 NDUFB3O43676 98 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 TFF1P04155 84 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 GNAO1P09471 354 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 SELLP14151 372 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 MMP9P14780 707 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 FPR2P25090 351 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 FUT6P51993 359 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 SLC34A1Q06495 639 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 IL24Q13007 206 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 DGUOKQ16854 277 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 UTS2BQ765I0 119 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 ANGPTL5Q86XS5 388 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 PNLDC1Q8NA58 520 aaKnown RBP17.44■□□□□ 0.38
PNKP-209ENST00000596726 TRMT10AQ8TBZ6 339 aaKnown RBP17.44■□□□□ 0.38
PNKP-209ENST00000596726 FGGYQ96C11 551 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 MED30Q96HR3 178 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 ZNF488Q96MN9 340 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 SLC6A7Q99884 636 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 NRIP2Q9BQI9 281 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 HES4Q9HCC6 221 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 ZNF69Q9UC07 566 aa17.44■□□□□ 0.38
PNKP-209ENST00000596726 RPUSD1Q9UJJ7 312 aaKnown RBP17.44■□□□□ 0.38
PNKP-209ENST00000596726 IGKV1-9A0A0C4DH69 117 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 FAM230AA0A1W2PPH8 454 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 ZNF879B4DU55 563 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 PLATP00750 562 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 IGHV4-38-2P0DP08 117 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 ETV1P50549 477 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 GBX2P52951 348 aaPredicted RBP17.43■□□□□ 0.38
PNKP-209ENST00000596726 HILS1P60008 231 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 ERVK11-1P61568 191 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 IL13RA1P78552 427 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 IKZF1Q13422 519 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 LRRC10Q5BKY1 277 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 LAIR2Q6ISS4 152 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 ZNF676Q8N7Q3 588 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 DNAAF1Q8NEP3 725 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 OR51A4Q8NGJ6 313 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 SPATA3Q8NHX4 192 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 HAVCR2Q8TDQ0 301 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 NPRL2Q8WTW4 380 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 FBLIM1Q8WUP2 373 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 DMRTB1Q96MA1 342 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 SUCNR1Q9BXA5 334 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 DIMT1Q9UNQ2 313 aaKnown RBP17.43■□□□□ 0.38
PNKP-209ENST00000596726 MAB21L2Q9Y586 359 aa17.43■□□□□ 0.38
PNKP-209ENST00000596726 ZFPL1O95159 310 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 RPSAP08865 295 aaKnown RBP17.42■□□□□ 0.38
PNKP-209ENST00000596726 CNN3Q15417 329 aaKnown RBP17.42■□□□□ 0.38
PNKP-209ENST00000596726 SMIM21Q3B7S5 101 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 C9orf139Q6ZV77 190 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 C8orf59Q8N0T1 100 aaPredicted RBP17.42■□□□□ 0.38
PNKP-209ENST00000596726 BPIFB2Q8N4F0 458 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 C22orf15Q8WYQ4 148 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 SDSLQ96GA7 329 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 DCTN5Q9BTE1 182 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 SIRPDQ9H106 197 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 VCXQ9H320 206 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 CNTD2Q9H8S5 307 aa17.42■□□□□ 0.38
PNKP-209ENST00000596726 CAB39Q9Y376 341 aaPredicted RBP17.42■□□□□ 0.38
PNKP-209ENST00000596726 ERICH4A6NGS2 130 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 TMEM212A6NML5 194 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 RGS9O75916 674 aaPredicted RBP17.41■□□□□ 0.38
PNKP-209ENST00000596726 CCDC159P0C7I6 412 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 ATF1P18846 271 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 GABRA2P47869 451 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms