RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 KCNK7Q9Y2U2 307 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 IGHG1P01857 330 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 IFNA6P05013 189 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 CLRN1P58418 232 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 ACTBL2Q562R1 376 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 ANGPTL5Q86XS5 388 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 OR5AS1Q8N127 324 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 ADAD2Q8NCV1 583 aaKnown RBP12.75□□□□□ -0.37
CCDC43-203ENST00000588210 POC1BQ8TC44 478 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 OR51E1Q8TCB6 317 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 FBXW5Q969U6 566 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 WDYHV1Q96HA8 205 aa12.75□□□□□ -0.37
CCDC43-203ENST00000588210 C1orf147Q96MC9 270 aaPredicted RBP12.75□□□□□ -0.37
CCDC43-203ENST00000588210 A0A0A6YYD4 124 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 AHRRA9YTQ3 701 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 E9PLN8 166 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 CCL21O00585 134 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 VAMP1P23763 118 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 PTGER4P35408 488 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 LHX2P50458 406 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 P2RY4P51582 365 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 SNTB1Q13884 538 aaKnown RBP12.74□□□□□ -0.37
CCDC43-203ENST00000588210 ATXN7L3Q14CW9 347 aaPredicted RBP12.74□□□□□ -0.37
CCDC43-203ENST00000588210 PAN3Q58A45 887 aaKnown RBP12.74□□□□□ -0.37
CCDC43-203ENST00000588210 VAX1Q5SQQ9 334 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF585AQ6P3V2 769 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 PGAP1Q75T13 922 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF101Q8IZC7 436 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 VKORC1Q9BQB6 163 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 NICN1Q9BSH3 213 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 MBD2Q9UBB5 411 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 MRPS28Q9Y2Q9 187 aaKnown RBP12.74□□□□□ -0.37
CCDC43-203ENST00000588210 POLR1DQ9Y2S0 133 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 MEMO1Q9Y316 297 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 FAM25EA8MYX2 175 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 TRAF3IP2O43734 574 aaPredicted RBP12.74□□□□□ -0.37
CCDC43-203ENST00000588210 CRHP06850 196 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF708P17019 499 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 CCL1P22362 96 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 FAM122CQ6P4D5 195 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 SLC25A47Q6Q0C1 308 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 RTN4RL2Q86UN3 420 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 NAA40Q86UY6 237 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 INO80EQ8NBZ0 244 aaPredicted RBP12.74□□□□□ -0.37
CCDC43-203ENST00000588210 OR2AJ1Q8NGZ0 328 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 OR4K15Q8NH41 348 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 ARPC5LQ9BPX5 153 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
CCDC43-203ENST00000588210 PRELID1Q9Y255 219 aa12.74□□□□□ -0.37
CCDC43-203ENST00000588210 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CLEC18AA5D8T8 446 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CEACAM18A8MTB9 384 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 APOC3P02656 99 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 PMP2P02689 132 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 AKR1C4P17516 323 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CX3CR1P49238 355 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CLDN18P56856 261 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 KCNMB1Q16558 191 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 PNLIPRP3Q17RR3 467 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 BEX5Q5H9J7 111 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 GLIPR1L1Q6UWM5 242 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CLEC18BQ6UXF7 455 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 ARRDC1Q8N5I2 433 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CLEC18CQ8NCF0 446 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 OR8B12Q8NGG6 310 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 KCNG3Q8TAE7 436 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 STOML3Q8TAV4 291 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 MARCH1Q8TCQ1 289 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 NMES1Q9C002 83 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 TAS2R3Q9NYW6 316 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 CDC14BO60729 498 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 HIST1H1DP16402 221 aaKnown RBP12.73□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF121P58317 390 aaPredicted RBP12.73□□□□□ -0.37
CCDC43-203ENST00000588210 RAC1P63000 192 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 FAM189A2Q15884 450 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF239Q16600 458 aaKnown RBP12.73□□□□□ -0.37
CCDC43-203ENST00000588210 MICBQ29980 383 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 PLAC9Q5JTB6 97 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 UQCC3Q6UW78 93 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 RNF144BQ7Z419 303 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 ABHD12BQ7Z5M8 362 aaPredicted RBP12.73□□□□□ -0.37
CCDC43-203ENST00000588210 OR6X1Q8NH79 312 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 RAB3CQ96E17 227 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 PIGMQ9H3S5 423 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 SEC61A2Q9H9S3 476 aa12.73□□□□□ -0.37
CCDC43-203ENST00000588210 PNRC2Q9NPJ4 139 aaKnown RBP12.73□□□□□ -0.37
CCDC43-203ENST00000588210 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 UBR5O95071 2799 aaPredicted RBP12.72□□□□□ -0.37
CCDC43-203ENST00000588210 F5H0A9 414 aaPredicted RBP12.72□□□□□ -0.37
CCDC43-203ENST00000588210 F8VVB4 439 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 F8VWA3 439 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 TOR1AO14656 332 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 AGFG2O95081 481 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 MPIG6BO95866 241 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 PSMB6P28072 239 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 OR3A4PP47883 348 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms