RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	ERVK13-1	Q9NX77	482 aa		11.3	□□□□□ -0.6
CSNK1D-208	ENST00000578501	SLC7A11	Q9UPY5	501 aa		11.3	□□□□□ -0.6
CSNK1D-208	ENST00000578501	HSPE1-MOB4	S4R3N1	261 aa		11.3	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DOCK11	Q5JSL3	2073 aa		11.3	□□□□□ -0.6
CSNK1D-208	ENST00000578501	IRGM	A1A4Y4	181 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	NKX6-3	A6NJ46	265 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	OR4C45	A6NMZ5	311 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	OR2AT4	A6NND4	320 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ZNF879	B4DU55	563 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ANKRD65	E5RJM6	399 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501		H0YAE9	185 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	NDUFB3	O43676	98 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	VENTX	O95231	258 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	PLAT	P00750	562 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	PGA5	P0DJD9	388 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	FUT6	P51993	359 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	BPIFB3	P59826	476 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	IL13RA1	P78552	427 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ALKBH1	Q13686	389 aa	Known RBP	11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	UBE2V2	Q15819	145 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	LRRC10	Q5BKY1	277 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	C9orf139	Q6ZV77	190 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	FAM216B	Q8N7L0	139 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	LY6G5B	Q8NDX9	201 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	OR5T2	Q8NGG2	359 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	CYGB	Q8WWM9	190 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ST8SIA4	Q92187	359 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DCLRE1B	Q9H816	532 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	SNTG1	Q9NSN8	517 aa		11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.29	□□□□□ -0.6
CSNK1D-208	ENST00000578501	IGKV1D-17	A0A075B6S4	117 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501		A0A1B0GW55	424 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	SIGLEC5	O15389	551 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	CLIC3	O95833	236 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4L2	P0CJ85	424 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4L3	P0CJ86	424 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4L4	P0CJ87	422 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4L5	P0CJ88	424 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4L6	P0CJ89	424 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4L7	P0CJ90	424 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	PSG2	P11465	335 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	MMP9	P14780	707 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DCK	P27707	260 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	CAV3	P56539	151 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	GMFB	P60983	142 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	FGF12	P61328	243 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ELF3	P78545	371 aa	Predicted RBP	11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	IL24	Q13007	206 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	SMN1	Q16637	294 aa	Known RBP	11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	SMIM21	Q3B7S5	101 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ACP7	Q6ZNF0	438 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	UTS2B	Q765I0	119 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	C3orf56	Q8N813	242 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DNAAF1	Q8NEP3	725 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	C8orf46	Q8TAG6	207 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	SDSL	Q96GA7	329 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	GAFA1	Q96PS6	74 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	SLC6A7	Q99884	636 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	NRIP2	Q9BQI9	281 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	CNTD2	Q9H8S5	307 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ISG20L2	Q9H9L3	353 aa	Known RBP	11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	HES4	Q9HCC6	221 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	DUX4	Q9UBX2	424 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ZNF69	Q9UC07	566 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	ZNF222	Q9UK12	451 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	HHLA2	Q9UM44	414 aa		11.28	□□□□□ -0.6
CSNK1D-208	ENST00000578501	TMEM212	A6NML5	194 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501		H3BSH0	61 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SYNGR1	O43759	233 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TOX4	O94842	621 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	LIMS3	P0CW19	117 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	LIMS4	P0CW20	117 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	IGHV4-38-2	P0DP08	117 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CAPG	P40121	348 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	GBX2	P52951	348 aa	Predicted RBP	11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ERVK11-1	P61568	191 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	IKZF1	Q13422	519 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CNN3	Q15417	329 aa	Known RBP	11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	DGUOK	Q16854	277 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	METTL11B	Q5VVY1	283 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CALHM1	Q8IU99	346 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CNIH3	Q8TBE1	160 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ADAT3	Q96EY9	351 aa	Predicted RBP	11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	WDFY2	Q96P53	400 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	VCX	Q9H320	206 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	KPTN	Q9Y664	436 aa		11.27	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TRAV40	A0A0B4J280	105 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	FAM230A	A0A1W2PPH8	454 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MT-ND2	P03891	347 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CCDC159	P0C7I6	412 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PRKACB	P22694	351 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	GABRA2	P47869	451 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	COMP	P49747	757 aa	Predicted RBP	11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	RBP2	P50120	134 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PDCD1	Q15116	288 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CCDC58	Q4VC31	144 aa		11.26	□□□□□ -0.61

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