RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 Q499Y3 187 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 PRAMEF6Q5VXH4 476 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 LIPKQ5VXJ0 399 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 UTS2BQ765I0 119 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 PARP16Q8N5Y8 322 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 TSPAN14Q8NG11 270 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 HPSE2Q8WWQ2 592 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 RGP1Q92546 391 aaPredicted RBP11.54□□□□□ -0.56
NEIL1-220ENST00000568881 TMEM106AQ96A25 262 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 MDFIQ99750 246 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 ZCCHC4Q9H5U6 513 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 ZNF696Q9H7X3 374 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 VCX3AQ9NNX9 186 aa11.54□□□□□ -0.56
NEIL1-220ENST00000568881 TRBV5-5A0A0J9YX44 114 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 RNF212BA8MTL3 300 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 NDUFA2O43678 99 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 PRKACBP22694 351 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 FUT6P51993 359 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 GNB2P62879 340 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 LCN2P80188 198 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 ZNF154Q13106 437 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 MPPED2Q15777 294 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 UBE2V2Q15819 145 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 ARMCX4Q5H9R4 360 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 FAM76BQ5HYJ3 339 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 UBE2UQ5VVX9 321 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 OR1M1Q8NGA1 313 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 OR8B3Q8NGG8 313 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 NANPQ8TBE9 248 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 SPSB1Q96BD6 273 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 NEIL1Q96FI4 390 aaPredicted RBP11.53□□□□□ -0.56
NEIL1-220ENST00000568881 OPALINQ96PE5 141 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 OR8B2Q96RD0 313 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 MRI1Q9BV20 369 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 TMED9Q9BVK6 235 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 DCAF16Q9NXF7 216 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 CKLFQ9UBR5 152 aa11.53□□□□□ -0.56
NEIL1-220ENST00000568881 A0A0A6YYJ9 748 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 TRAV38-1A0A0B4J264 116 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 FAM230AA0A1W2PPH8 454 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 hCG_1807616A0A1W2PRN6 198 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 CEACAM18A8MTB9 384 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 ZNF879B4DU55 563 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 PHF1O43189 567 aaPredicted RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 TCF21O43680 179 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 ALX3O95076 343 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 ATF1P18846 271 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 PSMA1P25786 263 aaKnown RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 MAPK3P27361 379 aaPredicted RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 PSMB9P28065 219 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 RBP2P50120 134 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 RPS11P62280 158 aaKnown RBP eCLIP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 ZNF404Q494X3 552 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 DMRTC1Q5HYR2 192 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 BTNL3Q6UXE8 466 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 DCDC5Q6ZRR9 648 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 WDR86Q86TI4 376 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 ZNF573Q86YE8 665 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 DNAAF1Q8NEP3 725 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 OR13C5Q8NGS8 318 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 OR13C9Q8NGT0 318 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 NPRL2Q8WTW4 380 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 BORCS8Q96FH0 119 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 OR14A2Q96R54 314 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 SSBP3Q9BWW4 388 aaPredicted RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 C7orf69Q9H7B7 122 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 METTL17Q9H7H0 456 aaPredicted RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 TMEM165Q9HC07 324 aa11.52□□□□□ -0.57
NEIL1-220ENST00000568881 POLR3KQ9Y2Y1 108 aaPredicted RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 FBN1P35555 2871 aaKnown RBP11.52□□□□□ -0.57
NEIL1-220ENST00000568881 PQLC2LA1A4F0 135 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 A8MXK9 166 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 F5H0A9 414 aaPredicted RBP11.51□□□□□ -0.57
NEIL1-220ENST00000568881 MAGEB3O15480 346 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 SULT1B1O43704 296 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 RAB3AP20336 220 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 NPY4RP50391 375 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 ATP1B3P54709 279 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 PPP3R1P63098 170 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 SRSF2Q01130 221 aaKnown RBP11.51□□□□□ -0.57
NEIL1-220ENST00000568881 NEDD8Q15843 81 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 ACSM3Q53FZ2 586 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 SCCPDHQ8NBX0 429 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 ZNF418Q8TF45 676 aaPredicted RBP11.51□□□□□ -0.57
NEIL1-220ENST00000568881 RPL3LQ92901 407 aaKnown RBP11.51□□□□□ -0.57
NEIL1-220ENST00000568881 TMEM203Q969S6 136 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 TMEM246Q9BRR3 403 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 FGF23Q9GZV9 251 aaPredicted RBP11.51□□□□□ -0.57
NEIL1-220ENST00000568881 TLNRD1Q9H1K6 362 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 OR51I2Q9H344 312 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
NEIL1-220ENST00000568881 IGKV1-9A0A0C4DH69 117 aa11.5□□□□□ -0.57
NEIL1-220ENST00000568881 LGALS8O00214 317 aa11.5□□□□□ -0.57
NEIL1-220ENST00000568881 CCRL2O00421 344 aa11.5□□□□□ -0.57
NEIL1-220ENST00000568881 CDIPTO14735 213 aa11.5□□□□□ -0.57
NEIL1-220ENST00000568881 INMTO95050 263 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms