RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 DUX4L5P0CJ88 424 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DUX4L6P0CJ89 424 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DUX4L7P0CJ90 424 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF19P17023 458 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 AMY2BP19961 511 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 GLRA1P23415 457 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 MPZP25189 248 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 HAAOP46952 286 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 NANOS3P60323 173 aaKnown RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 GMFBP60983 142 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ELF3P78545 371 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ADARB1P78563 741 aaKnown RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 SRSF2Q01130 221 aaKnown RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 MRPL28Q13084 256 aaKnown RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 KLHL22Q53GT1 634 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DUX4L9Q6RFH8 374 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF788Q6ZQV5 615 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 LHFPL3Q86UP9 236 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 PHC2Q8IXK0 858 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 BPIFB2Q8N4F0 458 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DHRSXQ8N5I4 330 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 FAM216BQ8N7L0 139 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 PNLDC1Q8NA58 520 aaKnown RBP9.56□□□□□ -0.88
SLIRP-205ENST00000556310 POC1AQ8NBT0 407 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 OR52I1Q8NGK6 324 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 PP6455Q8WZ26 134 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ST8SIA4Q92187 359 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 SLC6A7Q99884 636 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF649Q9BS31 505 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 JAM3Q9BX67 310 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 SUCNR1Q9BXA5 334 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 SNTG1Q9NSN8 517 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ERVK13-1Q9NX77 482 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 FRRS1LQ9P0K9 344 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 DUX4Q9UBX2 424 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 SLC7A11Q9UPY5 501 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 POLDIP2Q9Y2S7 368 aa9.56□□□□□ -0.88
SLIRP-205ENST00000556310 ANK2Q01484 3957 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 TRAV40A0A0B4J280 105 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 IRGMA1A4Y4 181 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 OR4C45A6NMZ5 311 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 OR2AT4A6NND4 320 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 ADARB2-AS1A8MUL3 147 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 SIGLEC5O15389 551 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 VENTXO95231 258 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 PGA5P0DJD9 388 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 FPR2P25090 351 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 TGM4P49221 684 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 HILS1P60008 231 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 FGF12P61328 243 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 IL13RA1P78552 427 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 IL18R1Q13478 541 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 ALKBH1Q13686 389 aaKnown RBP9.55□□□□□ -0.88
SLIRP-205ENST00000556310 UBE2V2Q15819 145 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 SMN1Q16637 294 aaKnown RBP9.55□□□□□ -0.88
SLIRP-205ENST00000556310 SMIM21Q3B7S5 101 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 LRRC10Q5BKY1 277 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 BTN2A1Q7KYR7 527 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 RDH10Q8IZV5 341 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 OR5T2Q8NGG2 359 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 SPATA3Q8NHX4 192 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 CNIH3Q8TBE1 160 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 TRMT10AQ8TBZ6 339 aaKnown RBP9.55□□□□□ -0.88
SLIRP-205ENST00000556310 HAVCR2Q8TDQ0 301 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 ZFAND2BQ8WV99 257 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 TMIGD2Q96BF3 282 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 JMJD8Q96S16 334 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 C19orf24Q9BVV8 132 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 PKIBQ9C010 78 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 RASSF4Q9H2L5 321 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 VCXQ9H320 206 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 DCLRE1BQ9H816 532 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 FGF20Q9NP95 211 aaPredicted RBP9.55□□□□□ -0.88
SLIRP-205ENST00000556310 RASL12Q9NYN1 266 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 RPUSD1Q9UJJ7 312 aaKnown RBP9.55□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF222Q9UK12 451 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 HHLA2Q9UM44 414 aa9.55□□□□□ -0.88
SLIRP-205ENST00000556310 IGKV1D-17A0A075B6S4 117 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF879B4DU55 563 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 H0YAE9 185 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 NDUFB3O43676 98 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 SYNGR1O43759 233 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 NOS1APO75052 506 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-205ENST00000556310 RGS9O75916 674 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-205ENST00000556310 PLATP00750 562 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 SERPINA3P01011 423 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 GHRHP01286 108 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 RPSAP08865 295 aaKnown RBP9.54□□□□□ -0.88
SLIRP-205ENST00000556310 IGHV4-38-2P0DP08 117 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 PSG2P11465 335 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 SELLP14151 372 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 DCKP27707 260 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 CAPGP40121 348 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 FUT6P51993 359 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 IL24Q13007 206 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 IKZF1Q13422 519 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 CNN3Q15417 329 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms