RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	UNC79	Q9P2D8	2635 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	CRYBG3	Q68DQ2	2970 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	TRAV1-2	A0A0B4J238	106 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	CCDC160	A6NGH7	325 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	TRAPPC2L	H3BP13	241 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	TMEM178B	H3BS89	294 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	SYNGR1	O43759	233 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	ANGPTL7	O43827	346 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	GLRA1	P23415	457 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	PSMD7	P51665	324 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	MXD1	Q05195	221 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	PDZK1IP1	Q13113	114 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	FAM201A	Q5SY85	155 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	SHE	Q5VZ18	495 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	SFRP4	Q6FHJ7	346 aa	Predicted RBP	8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	WDR82	Q6UXN9	313 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	RNF144B	Q7Z419	303 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	OR10Z1	Q8NGY1	313 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	SLAMF9	Q96A28	289 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	ZNF488	Q96MN9	340 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	FOXC2	Q99958	501 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	PIMREG	Q9BSJ6	248 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	PKIB	Q9C010	78 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	TLNRD1	Q9H1K6	362 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	RNF167	Q9H6Y7	350 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	PLGRKT	Q9HBL7	147 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	DNAJB11	Q9UBS4	358 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	CACNA1D	Q01668	2161 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	DSCAM	O60469	2012 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	FBN2	P35556	2912 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	DCHS2	Q6V1P9	2916 aa		8.56	□□□□□ -1.04
CPSF7-221	ENST00000543545	POLQ	O75417	2590 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	PPIAL4E	A0A075B759	164 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	SMIM30	A4D0T7	59 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	PPIAL4D	F5H284	164 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	C3orf80	F5H4A9	247 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	RP2	O75695	350 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	NXPH2	O95156	264 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	CDRT1	O95170	752 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	PPIAL4F	P0DN26	164 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	ADRA2C	P18825	462 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	RAB3B	P20337	219 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	CD80	P33681	288 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	SDC2	P34741	201 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	PTGFR	P43088	359 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	OR3A4P	P47883	348 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	SERPINB10	P48595	397 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	MTNR1B	P49286	362 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	VBP1	P61758	197 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	IL24	Q13007	206 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	RSU1	Q15404	277 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	ZNF181	Q2M3W8	571 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	AWAT2	Q6E213	333 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	ANKRD13B	Q86YJ7	626 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	CDH26	Q8IXH8	852 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	C19orf18	Q8NEA5	215 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	CEP19	Q96LK0	163 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	NAA50	Q9GZZ1	169 aa	Known RBP	8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	METTL9	Q9H1A3	318 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	NARFL	Q9H6Q4	476 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	CNTD2	Q9H8S5	307 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	SMURF1	Q9HCE7	757 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	MRPS28	Q9Y2Q9	187 aa	Known RBP	8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	WIPI2	Q9Y4P8	454 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	PPIAL4A	Q9Y536	164 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	NPTN	Q9Y639	398 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545		V9GY05	133 aa		8.55	□□□□□ -1.04
CPSF7-221	ENST00000543545	IGHV3OR15-7	A0A075B7D8	119 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	IGHV4-30-2	A0A087WSY4	118 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	NBPF19	A0A087WUL8	3843 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	TRAV38-1	A0A0B4J264	116 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	SHISA3	A0PJX4	238 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	LGALS8	O00214	317 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	NDUFS8	O00217	210 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	WNT9B	O14905	357 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	HTR3B	O95264	441 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	CSTB	P04080	98 aa	Known RBP	8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	CLEC2L	P0C7M8	214 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	PGA5	P0DJD9	388 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	CALCB	P10092	127 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	EGR1	P18146	543 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	BCL3	P20749	454 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	MPZ	P25189	248 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	HTR2C	P28335	458 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	TGFBR1	P36897	503 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	CFHR2	P36980	270 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	SNU13	P55769	128 aa	Known RBP	8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	OR10A3	P58181	314 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	ZP1	P60852	638 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	NCS1	P62166	190 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	BTG1	P62324	171 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	HOXA4	Q00056	320 aa	Predicted RBP	8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	P2RY14	Q15391	338 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	RAB11B	Q15907	218 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	MICB	Q29980	383 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	SLC22A6	Q4U2R8	563 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	GLIPR1L1	Q6UWM5	242 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	PRSS57	Q6UWY2	283 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	TPRA1	Q86W33	373 aa		8.54	□□□□□ -1.04
CPSF7-221	ENST00000543545	SAXO1	Q8IYX7	474 aa		8.54	□□□□□ -1.04

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms