RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SERPINA3	P01011	423 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	IGHV2-70	P01814	119 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	ALDOB	P05062	364 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	CD2	P06729	351 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	HCK	P08631	526 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4L2	P0CJ85	424 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4L3	P0CJ86	424 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4L4	P0CJ87	422 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4L5	P0CJ88	424 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4L6	P0CJ89	424 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4L7	P0CJ90	424 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	CD37	P11049	281 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	TNFRSF1A	P19438	455 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	SRM	P19623	302 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	GIF	P27352	417 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	CALR	P27797	417 aa	Known RBP	12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	BDKRB2	P30411	391 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	IL2RG	P31785	369 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	POU3F4	P49335	361 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	PDLIM4	P50479	330 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	MTCP1	P56278	107 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	CAV3	P56539	151 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	CNN3	Q15417	329 aa	Known RBP	12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	TRAM1	Q15629	374 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	KISS1	Q15726	138 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	HSD17B12	Q53GQ0	312 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DDI2	Q5TDH0	399 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	SLC25A26	Q70HW3	274 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	SATL1	Q86VE3	508 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	FGFRL1	Q8N441	504 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	OR4D6	Q8NGJ1	314 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	SPSB1	Q96BD6	273 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	BORCS8	Q96FH0	119 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	C1orf147	Q96MC9	270 aa	Predicted RBP	12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	CHODL	Q9H9P2	273 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	FN3KRP	Q9HA64	309 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	EXOSC4	Q9NPD3	245 aa	Known RBP	12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	ZNF581	Q9P0T4	197 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	DUX4	Q9UBX2	424 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	SLC7A11	Q9UPY5	501 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	AK6	Q9Y3D8	172 aa	Known RBP	12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	WIPI2	Q9Y4P8	454 aa		12.2	□□□□□ -0.46
MATR3-238	ENST00000512107	YLPM1	P49750	1951 aa	Known RBP	12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	LOC100506127	A0A0U1RQW1	187 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107		A0A1W2PP11	408 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	PPIH	O43447	177 aa	Known RBP	12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	BCL3	P20749	454 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	PRKACB	P22694	351 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	FGF9	P31371	208 aa	Predicted RBP	12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	RBP2	P50120	134 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	ERVK11-1	P61568	191 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	PDZK1IP1	Q13113	114 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	ZNF181	Q2M3W8	571 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	HFE	Q30201	348 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	LYPD2	Q6UXB3	125 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	LHFPL2	Q6ZUX7	228 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	DEFB108B	Q8NET1	73 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	OR10K1	Q8NGX5	313 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	FAM168A	Q92567	244 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	NARFL	Q9H6Q4	476 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	CNTD2	Q9H8S5	307 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	BARX1	Q9HBU1	254 aa	Predicted RBP	12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	TMEM165	Q9HC07	324 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	TMEM138	Q9NPI0	162 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	SNTG1	Q9NSN8	517 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	RNF7	Q9UBF6	113 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	NOP16	Q9Y3C1	178 aa	Known RBP	12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	NPTN	Q9Y639	398 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	CCDC168	Q8NDH2	2452 aa		12.19	□□□□□ -0.46
MATR3-238	ENST00000512107	ABCA2	Q9BZC7	2435 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	hCG_1807616	A0A1W2PRN6	198 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	SRRM5	B3KS81	715 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	CDRT1	O95170	752 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	SFTPB	P07988	381 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	ERCC1	P07992	297 aa	Predicted RBP	12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	PGA5	P0DJD9	388 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	PSMA1	P25786	263 aa	Known RBP	12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	CFHR2	P36980	270 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	NR4A2	P43354	598 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	CEBPD	P49716	269 aa	Predicted RBP	12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	ATP1B3	P54709	279 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	NCS1	P62166	190 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	PLA2G7	Q13093	441 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	GPR107	Q5VW38	600 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	PRSS57	Q6UWY2	283 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	FAM90A1	Q86YD7	464 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	POC1A	Q8NBT0	407 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	OR5T2	Q8NGG2	359 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	SLC25A28	Q96A46	364 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	NRIP2	Q9BQI9	281 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	PKIB	Q9C010	78 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	HES4	Q9HCC6	221 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	DLL4	Q9NR61	685 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	RBFOX1	Q9NWB1	397 aa	Known RBP	12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	METRN	Q9UJH8	293 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	EDAR	Q9UNE0	448 aa		12.18	□□□□□ -0.46
MATR3-238	ENST00000512107	MAP1A	P78559	2803 aa	Predicted RBP	12.17	□□□□□ -0.46
MATR3-238	ENST00000512107		A0A0B4J203	849 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms