RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 TCP10LQ8TDR4 215 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 NEK7Q8TDX7 302 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 CA5BP1Q8WTZ4 195 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 C15orf40Q8WUR7 153 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 RNF133Q8WVZ7 376 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 DNAJB3Q8WWF6 145 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 NAT6Q93015 286 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 S100PBPQ96BU1 408 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 CSPG4P5Q96PW8 444 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 PRRT1Q99946 306 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 MAP1LC3CQ9BXW4 147 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 PIGUQ9H490 435 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 ANKHQ9HCJ1 492 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 GID8Q9NWU2 228 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 SLC22A13Q9Y226 551 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 FADS3Q9Y5Q0 445 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 GPR179Q6PRD1 2367 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 MTUS2Q5JR59 1369 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 AK9Q5TCS8 1911 aa2.6□□□□□ -1.99
NCKAP1-208ENST00000495619 ADGRL3Q9HAR2 1447 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 UQCRHLA0A096LP55 91 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 KBTBD11-OT1A0A1B0GTJ5 212 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 E7EWF7 191 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 PSMG1O95456 288 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 IFNA5P01569 189 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 IGKV1D-16P01601 117 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 UQCRHP07919 91 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 OCM2P0CE71 109 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 HSPD1P10809 573 aaKnown RBP2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 ME2P23368 584 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 PSMB5P28074 263 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 GABRR2P28476 465 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 CDK9P50750 372 aaKnown RBP2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 NKX2-5P52952 324 aaPredicted RBP2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 UBE2KP61086 200 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 ERVS71-1P61550 626 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 STX4Q12846 297 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 BNIP2Q12982 314 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 SLC9A3R2Q15599 337 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 ZNHIT3Q15649 155 aaPredicted RBP2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 TNXAQ16473 311 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 AKIRIN2Q53H80 203 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 C9orf135Q5VTT2 229 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 REEP3Q6NUK4 255 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 PLET1Q6UQ28 207 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 DPPA2Q7Z7J5 298 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 TMEM150AQ86TG1 271 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 HS3ST5Q8IZT8 346 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 SYS1Q8N2H4 156 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 OSR2Q8N2R0 312 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 INO80EQ8NBZ0 244 aaPredicted RBP2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 OR2D3Q8NGH3 330 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 HGDQ93099 445 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 RNF170Q96K19 258 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 OLFM3Q96PB7 478 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 RBBP8Q99708 897 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 EBNA1BP2Q99848 306 aaKnown RBP2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 TIMM29Q9BSF4 260 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 BCL2L14Q9BZR8 327 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 METTL9Q9H1A3 318 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 HRASLSQ9HDD0 168 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 ABCB9Q9NP78 766 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 TMEM9BQ9NQ34 198 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 XPNPEP1Q9NQW7 623 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 INIPQ9NRY2 104 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 ARMC1Q9NVT9 282 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 CLN8Q9UBY8 286 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 NXT1Q9UKK6 140 aaKnown RBP2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 FBXL3Q9UKT7 428 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 MMACHCQ9Y4U1 282 aa2.59□□□□□ -1.99
NCKAP1-208ENST00000495619 PTPRGP23470 1445 aa2.59□□□□□ -2
NCKAP1-208ENST00000495619 KCNE1BA0A087WTH5 132 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 ZNF729A6NN14 1252 aaPredicted RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 CENPXA8MT69 81 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 M0QXV9 152 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 SIRPB1O00241 398 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 SLC9A3R1O14745 358 aaPredicted RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 NUPL2O15504 423 aaKnown RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 SC5DO75845 299 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 SNAP29O95721 258 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 LDOC1O95751 146 aaPredicted RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 TFPTP0C1Z6 253 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 BGNP21810 368 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 CRABP1P29762 137 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 MAGEA3P43357 314 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 RPL14P50914 215 aaKnown RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 VSX2P58304 361 aaPredicted RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 FLI1Q01543 452 aaPredicted RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 QPRTQ15274 297 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 ZNF726P1Q15940 193 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 PGGHGQ32M88 737 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 HACD4Q5VWC8 232 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 TMEM205Q6UW68 189 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 CD300LGQ6UXG3 332 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 LRRN1Q6UXK5 716 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 NPSR1Q6W5P4 371 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 SETD3Q86TU7 594 aaPredicted RBP2.58□□□□□ -2
NCKAP1-208ENST00000495619 Q8N402 240 aa2.58□□□□□ -2
NCKAP1-208ENST00000495619 TMEM156Q8N614 296 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms