RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 RASL12Q9NYN1 266 aa12.66□□□□□ -0.38
SNX13-207ENST00000475800 KCNS2Q9ULS6 477 aa12.66□□□□□ -0.38
SNX13-207ENST00000475800 LRCH1Q9Y2L9 728 aa12.66□□□□□ -0.38
SNX13-207ENST00000475800 SIRT4Q9Y6E7 314 aaPredicted RBP12.66□□□□□ -0.38
SNX13-207ENST00000475800 FBN3Q75N90 2809 aa12.66□□□□□ -0.38
SNX13-207ENST00000475800 FAM157AC9JC47 383 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 C3orf80F5H4A9 247 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 ZNF205O95201 554 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 MSMBP08118 114 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 ACAA1P09110 424 aaPredicted RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 CELP19835 753 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 AZGP1P25311 298 aaKnown RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 CD80P33681 288 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 DVL1P1P54792 670 aaPredicted RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 IL24Q13007 206 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 HNRNPA0Q13151 305 aaKnown RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 GPR50Q13585 617 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 MED22Q15528 200 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 TBCEQ15813 527 aaPredicted RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 CHRFAM7AQ494W8 412 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 Q499Y3 187 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 ESCO2Q56NI9 601 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 DMRTC1Q5HYR2 192 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 SFRP4Q6FHJ7 346 aaPredicted RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 GLCCI1Q86VQ1 547 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 SPATA3Q8NHX4 192 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 NPRL2Q8WTW4 380 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 SGCDQ92629 289 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 PGLYRP3Q96LB9 341 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 OPALINQ96PE5 141 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 METTL17Q9H7H0 456 aaPredicted RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 ISYNA1Q9NPH2 558 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 TMEM160Q9NX00 188 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 DNAJB11Q9UBS4 358 aa12.65□□□□□ -0.38
SNX13-207ENST00000475800 LSM2Q9Y333 95 aaKnown RBP12.65□□□□□ -0.38
SNX13-207ENST00000475800 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.39
SNX13-207ENST00000475800 TRAV20A0A0B4J274 112 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 A8MXK9 166 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 SULT1B1O43704 296 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 NOS1APO75052 506 aaPredicted RBP12.64□□□□□ -0.39
SNX13-207ENST00000475800 CYB5AP00167 134 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 WNT2P09544 360 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 EGR1P18146 543 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 RAB3AP20336 220 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 GLRA1P23415 457 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 MAPK3P27361 379 aaPredicted RBP12.64□□□□□ -0.39
SNX13-207ENST00000475800 NPY4RP50391 375 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 SMIM21Q3B7S5 101 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 FAM90A1Q86YD7 464 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 PHC2Q8IXK0 858 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 OR13C9Q8NGT0 318 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 TMEM106AQ96A25 262 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 TMIGD2Q96BF3 282 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 OR5M11Q96RB7 305 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 DNTTIP1Q9H147 329 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 KAAG1Q9UBP8 84 aa12.64□□□□□ -0.39
SNX13-207ENST00000475800 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 IGKV1-9A0A0C4DH69 117 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 MAGEB3O15480 346 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 AKR7A2O43488 359 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 RHBDL1O75783 438 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 IFNA2P01563 188 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 PGA5P0DJD9 388 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 GATA3P23771 443 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 RBMXP38159 391 aaKnown RBP12.63□□□□□ -0.39
SNX13-207ENST00000475800 SOX2P48431 317 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 MTCP1P56278 107 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 PPP3R1P63098 170 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 SRSF2Q01130 221 aaKnown RBP12.63□□□□□ -0.39
SNX13-207ENST00000475800 SLC36A1Q7Z2H8 476 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 MKXQ8IYA7 352 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 Q8IYB0 196 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 UFD1Q92890 307 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 TMEM186Q96B77 213 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 SSBP3Q9BWW4 388 aaPredicted RBP12.63□□□□□ -0.39
SNX13-207ENST00000475800 CKLFQ9UBR5 152 aa12.63□□□□□ -0.39
SNX13-207ENST00000475800 POLR3KQ9Y2Y1 108 aaPredicted RBP12.63□□□□□ -0.39
SNX13-207ENST00000475800 PNMA8CA0A1B0GUJ8 204 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 NKX6-3A6NJ46 265 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.62□□□□□ -0.39
SNX13-207ENST00000475800 TNFRSF13BO14836 293 aaPredicted RBP12.62□□□□□ -0.39
SNX13-207ENST00000475800 ADAM20O43506 726 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 HCKP08631 526 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 PITPNBP48739 271 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 RPS11P62280 158 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNX13-207ENST00000475800 GNB2P62879 340 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
SNX13-207ENST00000475800 C11orf91Q3C1V1 193 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 ATPAF1Q5TC12 328 aaPredicted RBP12.62□□□□□ -0.39
SNX13-207ENST00000475800 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 ZNF367Q7RTV3 350 aa12.62□□□□□ -0.39
SNX13-207ENST00000475800 ANGPTL5Q86XS5 388 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms