RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 CSF3P09919 207 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 PTAFRP25105 342 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 CDKN1BP46527 198 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 OR3A3P47888 321 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 MEOX2P50222 304 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 PMPCAQ10713 525 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 KLRB1Q12918 225 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 SPANXN2Q5MJ10 180 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 OR51D1Q8NGF3 324 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 OR13C9Q8NGT0 318 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 RNASE11Q8TAA1 199 aaKnown RBP7.12□□□□□ -1.27
BRCA1-208ENST00000468300 CYYR1Q96J86 154 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 DMRTA2Q96SC8 542 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 SFXN3Q9BWM7 321 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 CHST5Q9GZS9 411 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 OR10A2Q9H208 303 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 IGKV1-27A0A075B6S5 117 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 TMEM272A0A1B0GTI8 110 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 FABP12A6NFH5 140 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 DHRS7CA6NNS2 312 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 LANCL1O43813 399 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 AGFG2O95081 481 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF12P17014 697 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 TALDO1P37837 337 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 LY6DQ14210 128 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 GK2Q14410 553 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-208ENST00000468300 HLXQ14774 488 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-208ENST00000468300 SMCO1Q147U7 214 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 C2orf76Q3KRA6 126 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 AKIRIN2Q53H80 203 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 UBE2NLQ5JXB2 153 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 XKRXQ6PP77 449 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 METAP1DQ6UB28 335 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-208ENST00000468300 DCDC5Q6ZRR9 648 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 RELL2Q8NC24 303 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-208ENST00000468300 OR5T1Q8NG75 326 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 OR5D14Q8NGL3 314 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 OR10J5Q8NHC4 309 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 ZFP3Q96NJ6 502 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 SPACA5Q96QH8 159 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 SLITRK2Q9H156 845 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 METTL17Q9H7H0 456 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-208ENST00000468300 TMEM138Q9NPI0 162 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 IFT46Q9NQC8 304 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 PIGLQ9Y2B2 252 aa7.12□□□□□ -1.27
BRCA1-208ENST00000468300 IL2RAP01589 272 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 HLA-DQB1P01920 261 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 ALDOBP05062 364 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF35P13682 527 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 BDKRB2P30411 391 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 CCKARP32238 428 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 HOXA1P49639 335 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-208ENST00000468300 SELENOVP59797 346 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 UNC119Q13432 240 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 FAM131AQ6UXB0 335 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 C10orf35Q96D05 121 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF486Q96H40 463 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-208ENST00000468300 TMEM246Q9BRR3 403 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 NGBQ9NPG2 151 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 PRELID3BQ9Y3B1 194 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 SLC25A15Q9Y619 301 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 MYO7BQ6PIF6 2116 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 ZGRF1Q86YA3 2104 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 FAM172BPA6NC97 362 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 TMEM8BA6NDV4 472 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 HSPA12AO43301 675 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 LILRA1O75019 489 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 GSTP1P09211 210 aaKnown RBP7.11□□□□□ -1.27
BRCA1-208ENST00000468300 PRF1P14222 555 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 AZGP1P25311 298 aaKnown RBP7.11□□□□□ -1.27
BRCA1-208ENST00000468300 THBS4P35443 961 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 PTH2RP49190 550 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 P2RY6Q15077 328 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF181Q2M3W8 571 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 DNM1P46Q6ZS02 220 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 PGAP1Q75T13 922 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 GDPD3Q7L5L3 318 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 C1QL2Q7Z5L3 287 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 CENPSQ8N2Z9 138 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 SLC30A7Q8NEW0 376 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 FAM3DQ96BQ1 224 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 MARS2Q96GW9 593 aaKnown RBP7.11□□□□□ -1.27
BRCA1-208ENST00000468300 PIMREGQ9BSJ6 248 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 CCDC32Q9BV29 185 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 CHODLQ9H9P2 273 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 TMEM140Q9NV12 185 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 CKLFQ9UBR5 152 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 PCDHB10Q9UN67 800 aa7.11□□□□□ -1.27
BRCA1-208ENST00000468300 SSX4O60224 188 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 CBR1P16152 277 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 NDUFB7P17568 137 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 RAB3AP20336 220 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 HTR2CP28335 458 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 OPRM1P35372 400 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 PER3P56645 1201 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 MRPL49Q13405 166 aaKnown RBP7.1□□□□□ -1.27
BRCA1-208ENST00000468300 EIF2S3LQ2VIR3 472 aaKnown RBP7.1□□□□□ -1.27
BRCA1-208ENST00000468300 COMMD2Q86X83 199 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 C17orf78Q8N4C9 275 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 SEMA6DQ8NFY4 1073 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms