RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 HSMCR30P0CW71 290 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 RPS2P15880 293 aaKnown RBP9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ZNF16P17020 682 aaPredicted RBP9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 EGR1P18146 543 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 RAB3AP20336 220 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 GLRA1P23415 457 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MAP2K4P45985 399 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MTCP1P56278 107 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 RPS11P62280 158 aaKnown RBP eCLIP9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 PPP3R1P63098 170 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 DOC2BQ14184 412 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 KCTD21Q4G0X4 260 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 SFRP4Q6FHJ7 346 aaPredicted RBP9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ZNF529Q6P280 563 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NLRC3Q7RTR2 1065 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CALHM1Q8IU99 346 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 POC1AQ8NBT0 407 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 OR13C5Q8NGS8 318 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 OR51F2Q8NH61 342 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MGLLQ99685 303 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ACOT13Q9NPJ3 140 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 RASL12Q9NYN1 266 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 DNAJB11Q9UBS4 358 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 LRCH1Q9Y2L9 728 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CR1P17927 2039 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MED13LQ71F56 2210 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CSPG4Q6UVK1 2322 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 IGKV1-27A0A075B6S5 117 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ZNF879B4DU55 563 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FAM157AC9JC47 383 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 SYNGR1O43759 233 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CYB5AP00167 134 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 HCKP08631 526 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 PGA5P0DJD9 388 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FSTP19883 344 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 PSMA1P25786 263 aaKnown RBP9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 EMX1Q04741 257 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TPBGQ13641 420 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TRAM1Q15629 374 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 SMIM21Q3B7S5 101 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ESCO2Q56NI9 601 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 LIPKQ5VXJ0 399 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FAM166AQ6J272 317 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ZNF773Q6PK81 442 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ANGPTL5Q86XS5 388 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FAM90A1Q86YD7 464 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 LURAP1LQ8IV03 231 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 SPARTQ8N0X7 666 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 C19orf18Q8NEA5 215 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 DEFB108BQ8NET1 73 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 OR8B3Q8NGG8 313 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FCGR1BQ92637 280 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TMIGD2Q96BF3 282 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NEIL1Q96FI4 390 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 OR14A2Q96R54 314 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 OR8B2Q96RD0 313 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NRIP2Q9BQI9 281 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 DNTTIP1Q9H147 329 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 GSX1Q9H4S2 264 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TAS2R4Q9NYW5 299 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NLKQ9UBE8 527 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 KAAG1Q9UBP8 84 aa9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ANK3Q12955 4377 aaKnown RBP9.75□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TRBV5-7A0A0A0MS05 114 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TRAV20A0A0B4J274 112 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 A8MXK9 166 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FOXH1O75593 365 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 GPX5O75715 221 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TNFAIP8O95379 198 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TGFAP01135 160 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ALDOBP05062 364 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MSMBP08118 114 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 WNT2P09544 360 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CPEP16870 476 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 PCMT1P22061 227 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NPY4RP50391 375 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 DVL1P1P54792 670 aaPredicted RBP9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ERVK11-1P61568 191 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 KISS1Q15726 138 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 UBE2UQ5VVX9 321 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 STUMQ69YW2 141 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ASPHD2Q6ICH7 369 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 SLC25A26Q70HW3 274 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 GLCCI1Q86VQ1 547 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MKXQ8IYA7 352 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 Q8IYB0 196 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 DERL3Q96Q80 235 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TMED9Q9BVK6 235 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 WDR13Q9H1Z4 485 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TMEM138Q9NPI0 162 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 KCNS2Q9ULS6 477 aa9.74□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NSD1Q96L73 2696 aaPredicted RBP9.73□□□□□ -0.85
TRAF3IP1-204ENST00000462122 IGHV3OR15-7A0A075B7D8 119 aa9.73□□□□□ -0.85
TRAF3IP1-204ENST00000462122 PPIAL4CA0A0B4J2A2 164 aa9.73□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NKX6-3A6NJ46 265 aa9.73□□□□□ -0.85
TRAF3IP1-204ENST00000462122 OR2AT4A6NND4 320 aa9.73□□□□□ -0.85
TRAF3IP1-204ENST00000462122 A8MV72 311 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms