RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 V9GY05 133 aa13.02□□□□□ -0.33
COL11A1-204ENST00000427239 PDZD2O15018 2839 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 CACNA1DQ01668 2161 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 NOL3O60936 208 aaKnown RBP13.01□□□□□ -0.33
COL11A1-204ENST00000427239 IRF2P14316 349 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 PTGFRP43088 359 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 TMEM33P57088 247 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 VBP1P61758 197 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 RIN1Q13671 783 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 WDR82Q6UXN9 313 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 CDH24Q86UP0 819 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 LYPD6Q86Y78 171 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 SAXO1Q8IYX7 474 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 ZSCAN4Q8NAM6 433 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-204ENST00000427239 OR10Z1Q8NGY1 313 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 OR51F2Q8NH61 342 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 RNF7Q9UBF6 113 aa13.01□□□□□ -0.33
COL11A1-204ENST00000427239 AK6Q9Y3D8 172 aaKnown RBP13.01□□□□□ -0.33
COL11A1-204ENST00000427239 SHISA3A0PJX4 238 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 CDC14BO60729 498 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 NOS1APO75052 506 aaPredicted RBP13□□□□□ -0.33
COL11A1-204ENST00000427239 COL8A2P25067 703 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 PMELP40967 661 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 CRIP3Q6Q6R5 217 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 SLC25A26Q70HW3 274 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 PERPQ96FX8 193 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 RHOFQ9HBH0 211 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 TMEM106BQ9NUM4 274 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 CEPT1Q9Y6K0 416 aa13□□□□□ -0.33
COL11A1-204ENST00000427239 hCG_1807616A0A1W2PRN6 198 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 SLC22A1O15245 554 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 SSX4O60224 188 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 LY6HO94772 140 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 CDRT1O95170 752 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 LHBP01229 141 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 IL1AP01583 271 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 TMEM225BP0DP42 221 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 ZP1P60852 638 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 NCS1P62166 190 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 C1orf100Q5SVJ3 147 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 ZNF826PQ6ZT77 177 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 RNF144BQ7Z419 303 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 PXT1Q8NFP0 134 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 RFT1Q96AA3 541 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 S100A13Q99584 98 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 CNTD2Q9H8S5 307 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 CHODLQ9H9P2 273 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 GHRLQ9UBU3 117 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 TMEM178BH3BS89 294 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 ZNF701M0R085 212 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-204ENST00000427239 RP2O75695 350 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 RHBDL1O75783 438 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 CSF3P09919 207 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 POU3F4P49335 361 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 DSCR9P59020 149 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 USP43Q70EL4 1123 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 PEG10Q86TG7 708 aaKnown RBP12.99□□□□□ -0.33
COL11A1-204ENST00000427239 CROCCP3Q8IVE0 287 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 Q8IYB0 196 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 OR5D18Q8NGL1 313 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 OR6M1Q8NGM8 313 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 TNFAIP8L1Q8WVP5 186 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 YIPF5Q969M3 257 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 PPP1R14BQ96C90 147 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 ISOC1Q96CN7 298 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 GFI1Q99684 422 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 TREM2Q9NZC2 230 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 NPTNQ9Y639 398 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 CACNG2Q9Y698 323 aa12.99□□□□□ -0.33
COL11A1-204ENST00000427239 CSMD1Q96PZ7 3565 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 CCDC160A6NGH7 325 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 NOTOA8MTQ0 251 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 LYNX1G3V0Z9 82 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 TRAPPC2LH3BP13 241 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 SLC17A2O00624 439 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 SPRY1O43609 319 aaPredicted RBP12.98□□□□□ -0.33
COL11A1-204ENST00000427239 SYNGR1O43759 233 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 TMEM127O75204 238 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 ZNF780AO75290 641 aaPredicted RBP12.98□□□□□ -0.33
COL11A1-204ENST00000427239 FSTL3O95633 263 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 PGA5P0DJD9 388 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 LYNX1P0DP58 116 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 CFPP27918 469 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 HTR2CP28335 458 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 RPS19P39019 145 aaKnown RBP12.98□□□□□ -0.33
COL11A1-204ENST00000427239 MXD1Q05195 221 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 LRRC29Q8WV35 223 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 RBM38Q9H0Z9 239 aaKnown RBP12.98□□□□□ -0.33
COL11A1-204ENST00000427239 PLGRKTQ9HBL7 147 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 RASL12Q9NYN1 266 aa12.98□□□□□ -0.33
COL11A1-204ENST00000427239 IFITM5A6NNB3 132 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 NDUFS8O00217 210 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 PLATP00750 562 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 UBBP0CG47 229 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 TGFBR1P36897 503 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 OR3A4PP47883 348 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms