RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TECTBQ96PL2 329 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 C1QTNF6Q9BXI9 259 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 WNT5BQ9H1J7 359 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 TEX13DA0A0J9YY54 714 aaPredicted RBP19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 GLRA1P23415 457 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 DCUN1D4Q92564 292 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 MRPS24Q96EL2 167 aaKnown RBP19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 FAM173AQ9BQD7 235 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 RNF126Q9BV68 326 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 GPR87Q9BY21 358 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 PCDHB16Q9NRJ7 776 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 SPEF1Q9Y4P9 236 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 WDFY3Q8IZQ1 3526 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 PI3P19957 117 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 SNTB1Q13884 538 aaKnown RBP19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 RSPO4Q2I0M5 234 aaPredicted RBP19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 TUSC1Q2TAM9 212 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 NKAPLQ5M9Q1 402 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 GLS2Q9UI32 602 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 MCTS1Q9ULC4 181 aaKnown RBP19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 SLC7A11Q9UPY5 501 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 MYO7BQ6PIF6 2116 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 CD59P13987 128 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 FUT6P51993 359 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 SKA3Q8IX90 412 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 MAFIPQ8WZ33 124 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 CYYR1Q96J86 154 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 ZNF75AQ96N20 296 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 METTL8Q9H825 291 aaKnown RBP19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 B4GALT7Q9UBV7 327 aa19.36■□□□□ 0.69
NKX2-1-201ENST00000354822 COL6A3P12111 3177 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 RTTNQ86VV8 2226 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 NCKAP5O14513 1909 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 IGKV3D-15A0A087WSY6 115 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 PMS2P1A4D2B8 440 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 PINLYPA6NC86 204 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 XRCC2O43543 280 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 PATE4P0C8F1 98 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 LYL1P12980 280 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 PGAM2P15259 253 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 RPS2P15880 293 aaKnown RBP19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 DTYMKP23919 212 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 ANKRD55Q3KP44 614 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 SPINK14Q6IE38 97 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 STOML3Q8TAV4 291 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 C2orf50Q96LR7 162 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 ANXA10Q9UJ72 324 aa19.35■□□□□ 0.69
NKX2-1-201ENST00000354822 F8VVB4 439 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 F8VWA3 439 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 FAM3AP98173 230 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 NAAAQ02083 359 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 TMEM164Q5U3C3 297 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 ABHD17BQ5VST6 288 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 PRSS54Q6PEW0 395 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 ABHD3Q8WU67 409 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 SLC39A7Q92504 469 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 ZNF845Q96IR2 970 aaPredicted RBP19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 LINC00470Q9BZP3 86 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 SHARPINQ9H0F6 387 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 DECR2Q9NUI1 292 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 PARPBPQ9NWS1 579 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 IL36GQ9NZH8 169 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 ABI3Q9P2A4 366 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 ATPIF1Q9UII2 106 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 IGKV1-27A0A075B6S5 117 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 hCG_38984A0A1B0GV85 526 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 SPRY1O43609 319 aaPredicted RBP19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 ANGPTL7O43827 346 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 MRPL33O75394 65 aaKnown RBP19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 ADAP1O75689 374 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 PET100P0DJ07 73 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 STK11Q15831 433 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 PIK3IP1Q96FE7 263 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 NOSIPQ9Y314 301 aaKnown RBP19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 MEMO1Q9Y316 297 aa19.34■□□□□ 0.69
NKX2-1-201ENST00000354822 C21orf140B9A014 251 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 C9orf172C9J069 976 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 IFNA2P01563 188 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 MMP7P09237 267 aaPredicted RBP19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 OR8B8Q15620 311 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 TAF9Q16594 264 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 OR2M7Q8NG81 312 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 POM121Q96HA1 1249 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 ZNF2Q9BSG1 426 aaPredicted RBP19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 FAM117AQ9C073 453 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 C1orf123Q9NWV4 160 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 GPR160Q9UJ42 338 aa19.33■□□□□ 0.69
NKX2-1-201ENST00000354822 TERTO14746 1132 aaKnown RBP19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 CTSDP07339 412 aaPredicted RBP19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 TPT1P13693 172 aaKnown RBP19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 FAM74A1Q5RGS3 127 aa19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 FGFBP3Q8TAT2 258 aa19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 CMSS1Q9BQ75 279 aaKnown RBP19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 FAAP24Q9BTP7 215 aa19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 PRDM14Q9GZV8 571 aa19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 BCO1Q9HAY6 547 aa19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 BARX1Q9HBU1 254 aaPredicted RBP19.33■□□□□ 0.68
NKX2-1-201ENST00000354822 ZNF816-ZNF321PA0A0X1KG74 233 aa19.32■□□□□ 0.68
NKX2-1-201ENST00000354822 CDX4O14627 284 aaPredicted RBP19.32■□□□□ 0.68
NKX2-1-201ENST00000354822 HOXD4P09016 255 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms