RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 CLDN17P56750 224 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CDC42P60953 191 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 IL18R1Q13478 541 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 MESTQ5EB52 335 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 LDLRAD3Q86YD5 345 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 PARP16Q8N5Y8 322 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 OR14K1Q8NGZ2 314 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 OR52E5Q8NH55 327 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TRUB1Q8WWH5 349 aaKnown RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 ERGIC1Q969X5 290 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 GMPPAQ96IJ6 420 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 COX4I2Q96KJ9 171 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 NAA50Q9GZZ1 169 aaKnown RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CMC2Q9NRP2 79 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 MED29Q9NX70 200 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 ZNF226Q9NYT6 803 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TVP23BQ9NYZ1 205 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 NCOA6Q14686 2063 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 MPDZO75970 2070 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CXorf65A6NEN9 183 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 A6NIZ1 184 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 ZNF726A6NNF4 738 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CENPBD1B2RD01 187 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 E5RGE8 158 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 DENRO43583 198 aaKnown RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 PRKYO43930 277 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 SSX4O60224 188 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TRMUO75648 421 aaKnown RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TOXO94900 526 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CLIC3O95833 236 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TSPAN13O95857 204 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 IFNGP01579 166 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 ACADSP16219 412 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 PPP3CBP16298 524 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 COL8A1P27658 744 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 AGTR1P30556 359 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CEACAM8P31997 349 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CDKN2AP42771 156 aaKnown RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CA7P43166 264 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 PCYT1AP49585 367 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 COMPP49747 757 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 BIDP55957 195 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 RAP1BP61224 184 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 ISL1P61371 349 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 RAP1AP62834 184 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TUBA4AP68366 448 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 KRR1Q13601 381 aaKnown RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 HIST3H3Q16695 136 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 SLC25A30Q5SVS4 291 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 CASP12Q6UXS9 341 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 MRPL21Q7Z2W9 205 aaKnown RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 ENTHD1Q8IYW4 607 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 SLC37A3Q8NCC5 494 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 NPEPL1Q8NDH3 523 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 OR52E2Q8NGJ4 325 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 OR4K13Q8NH42 304 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TMEM54Q969K7 222 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 C10orf35Q96D05 121 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 SLC25A44Q96H78 314 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-202ENST00000347652 GRAMD2BQ96HH9 432 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 OR2M2Q96R28 347 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 SNX18Q96RF0 628 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 TTYH2Q9BSA4 534 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 EMC6Q9BV81 110 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 FUNDC2Q9BWH2 189 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 RNF6Q9Y252 685 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 NSG2Q9Y328 171 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 HSPE1-MOB4S4R3N1 261 aa4.44□□□□□ -1.7
VCAM1-202ENST00000347652 PHF3Q92576 2039 aaKnown RBP4.43□□□□□ -1.7
VCAM1-202ENST00000347652 CACNA1CQ13936 2221 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 A0A0A6YYH2 397 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 A0A0G2JK05 382 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 A6NJ64 397 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 GATCO43716 136 aaKnown RBP4.43□□□□□ -1.7
VCAM1-202ENST00000347652 CLDN1O95832 211 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 CRHP06850 196 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 PGA4P0DJD7 388 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 PGA3P0DJD8 388 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 KIR2DL2P43627 348 aaPredicted RBP4.43□□□□□ -1.7
VCAM1-202ENST00000347652 GPR12P47775 334 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 CDX1P47902 265 aaPredicted RBP4.43□□□□□ -1.7
VCAM1-202ENST00000347652 GZMKP49863 264 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 SELENOPP49908 381 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 ASCL1P50553 236 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 SNRPGP62308 76 aaKnown RBP4.43□□□□□ -1.7
VCAM1-202ENST00000347652 ZNF415Q09FC8 603 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 EFNB3Q15768 340 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 PHLDA2Q53GA4 152 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 ESCO2Q56NI9 601 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 LEG1Q6P5S2 330 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 C22orf34Q6ZV56 151 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 AAED1Q7RTV5 226 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 NUFIP2Q7Z417 695 aaKnown RBP4.43□□□□□ -1.7
VCAM1-202ENST00000347652 HDDC2Q7Z4H3 204 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 C20orf196Q8IYI0 205 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 TCEANCQ8N8B7 351 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 OR1J2Q8NGS2 313 aa4.43□□□□□ -1.7
VCAM1-202ENST00000347652 RHOXF1Q8NHV9 184 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms