RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CCL20P78556 96 aa13.97□□□□□ -0.17
LMNB1-201ENST00000261366 PDCD1Q15116 288 aa13.97□□□□□ -0.17
LMNB1-201ENST00000261366 ZNF239Q16600 458 aaKnown RBP13.97□□□□□ -0.17
LMNB1-201ENST00000261366 ZNF674Q2M3X9 581 aa13.97□□□□□ -0.17
LMNB1-201ENST00000261366 DTX1Q86Y01 620 aa13.97□□□□□ -0.17
LMNB1-201ENST00000261366 LMX1AQ8TE12 382 aa13.97□□□□□ -0.17
LMNB1-201ENST00000261366 LIME1Q9H400 295 aa13.97□□□□□ -0.17
LMNB1-201ENST00000261366 PADI1Q9ULC6 663 aa13.97□□□□□ -0.17
LMNB1-201ENST00000261366 ZNF850A8MQ14 1090 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 PPIHO43447 177 aaKnown RBP13.96□□□□□ -0.17
LMNB1-201ENST00000261366 PRF1P14222 555 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 GABRG2P18507 467 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 LTBRP36941 435 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 ARL4DP49703 201 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 GABREP78334 506 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 SLC35A1P78382 337 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 HAGHQ16775 308 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 DEFB133Q30KQ1 61 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 SOHLH1Q5JUK2 328 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 ZNF383Q8NA42 475 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 OR52M1Q8NGK5 317 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 OR1J1Q8NGS3 322 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 PIGQQ9BRB3 760 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 TMPRSS5Q9H3S3 457 aa13.96□□□□□ -0.17
LMNB1-201ENST00000261366 CPAMD8Q8IZJ3 1885 aa13.96□□□□□ -0.18
LMNB1-201ENST00000261366 MYF5P13349 255 aa13.96□□□□□ -0.18
LMNB1-201ENST00000261366 CSNK1EP49674 416 aaKnown RBP13.96□□□□□ -0.18
LMNB1-201ENST00000261366 HSD11B2P80365 405 aa13.96□□□□□ -0.18
LMNB1-201ENST00000261366 MEX3BQ6ZN04 569 aaKnown RBP13.96□□□□□ -0.18
LMNB1-201ENST00000261366 ZFP62Q8NB50 900 aaPredicted RBP13.96□□□□□ -0.18
LMNB1-201ENST00000261366 SUMF2Q8NBJ7 301 aa13.96□□□□□ -0.18
LMNB1-201ENST00000261366 FAAP24Q9BTP7 215 aa13.96□□□□□ -0.18
LMNB1-201ENST00000261366 ZNF700Q9H0M5 742 aa13.96□□□□□ -0.18
LMNB1-201ENST00000261366 BLACEA4D250 179 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 DANCRP0C864 163 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 FAM3AP98173 230 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 GFI1BQ5VTD9 330 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 P4HA3Q7Z4N8 544 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 MR1Q95460 341 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 PGAM5Q96HS1 289 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 SHDQ96IW2 340 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 SCRT1Q9BWW7 348 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 SLC35B3Q9H1N7 401 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 NCOA6Q14686 2063 aaPredicted RBP13.95□□□□□ -0.18
LMNB1-201ENST00000261366 CEACAM18A8MTB9 384 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 IFNA17P01571 189 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 HMGN3Q15651 99 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 TAF9Q16594 264 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 ABCA11PQ4W5N1 156 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 HIST2H3AQ71DI3 136 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 TMEM234Q8WY98 164 aa13.95□□□□□ -0.18
LMNB1-201ENST00000261366 SDK2Q58EX2 2172 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 BORCS7-ASMTA0A0B4J1R7 106 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 IFITM10A6NMD0 228 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 ZNF814B7Z6K7 855 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 TNFSF12O43508 249 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 OR5H8P0DN80 308 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 PAX6P26367 422 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 RGS19P49795 217 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 LRRC18Q8N456 261 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 UBAC2Q8NBM4 344 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 OR10D4PQ8NGN7 298 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 OR11L1Q8NGX0 322 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 STT3BQ8TCJ2 826 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 S100PBPQ96BU1 408 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 TAAR9Q96RI9 348 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 CD207Q9UJ71 328 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 RALGAPA1Q6GYQ0 2036 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 H0YL77 283 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 RNF224P0DH78 156 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 S100A2P29034 98 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 MYBPHQ13203 477 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 NSUN5P2Q63ZY6 315 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 VN1R1Q9GZP7 353 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 POMT1Q9Y6A1 747 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 TMEM131Q92545 1883 aa13.94□□□□□ -0.18
LMNB1-201ENST00000261366 VSTM2BA6NLU5 285 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 SPRY1O43609 319 aaPredicted RBP13.93□□□□□ -0.18
LMNB1-201ENST00000261366 EFNA2O43921 213 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 GAPDHP04406 335 aaKnown RBP13.93□□□□□ -0.18
LMNB1-201ENST00000261366 DRD1P21728 446 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 DEFA6Q01524 100 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 UBE2V2Q15819 145 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 C4orf17Q53FE4 359 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 GPHA2Q96T91 129 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 KLRF1Q9NZS2 232 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 VPS13AQ96RL7 3174 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 IGKV3D-11A0A0A0MRZ8 115 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 A0A1W2PQD3 144 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 CCDC85CA6NKD9 419 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 HTR5AP47898 357 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 RAB5CP51148 216 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 FBXW12Q6X9E4 464 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 SPNS3Q6ZMD2 512 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 UEVLDQ8IX04 471 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 OR1N1Q8NGS0 311 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 MARS2Q96GW9 593 aaKnown RBP13.93□□□□□ -0.18
LMNB1-201ENST00000261366 PRO1933Q9H354 126 aa13.93□□□□□ -0.18
LMNB1-201ENST00000261366 NELFAQ9H3P2 528 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms