RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 IFNL4K9M1U5 179 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 CDIPTO14735 213 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 CYB5AP00167 134 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 HPXP02790 462 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 ADRA2CP18825 462 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 SDC2P34741 201 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 RANBP1P43487 201 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 NCS1P62166 190 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 MRPS11P82912 194 aaKnown RBP12.44□□□□□ -0.42
CD48-203ENST00000613788 MPPED2Q15777 294 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 HAGHLQ6PII5 290 aaPredicted RBP12.44□□□□□ -0.42
CD48-203ENST00000613788 ANGPTL5Q86XS5 388 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 JAGN1Q8N5M9 183 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 SCCPDHQ8NBX0 429 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 OR11L1Q8NGX0 322 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 SPACA5Q96QH8 159 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 UQCC2Q9BRT2 126 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 PKIBQ9C010 78 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 TLNRD1Q9H1K6 362 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 METTL17Q9H7H0 456 aaPredicted RBP12.44□□□□□ -0.42
CD48-203ENST00000613788 UFSP2Q9NUQ7 469 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 POLDIP2Q9Y2S7 368 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 V9GY05 133 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 PTPN13Q12923 2485 aa12.44□□□□□ -0.42
CD48-203ENST00000613788 ARFGEF3Q5TH69 2177 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 IGKV1-27A0A075B6S5 117 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 IGHV1-69-2A0A0G2JMI3 117 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 SHISA3A0PJX4 238 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 J3QT63 122 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 SLC22A1O15245 554 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 NCR1O76036 304 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 CDRT1O95170 752 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 PAX1P15863 534 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 HFEQ30201 348 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 SPRNQ5BIV9 151 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 USP43Q70EL4 1123 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 MOGAT3Q86VF5 341 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 MKXQ8IYA7 352 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 AQP3Q92482 292 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 RDH5Q92781 318 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 HPS1Q92902 700 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 NINJ1Q92982 152 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 LURAP1Q96LR2 239 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 BARX1Q9HBU1 254 aaPredicted RBP12.43□□□□□ -0.42
CD48-203ENST00000613788 BATF3Q9NR55 127 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 DLL4Q9NR61 685 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 BEX4Q9NWD9 120 aaPredicted RBP12.43□□□□□ -0.42
CD48-203ENST00000613788 C1orf123Q9NWV4 160 aa12.43□□□□□ -0.42
CD48-203ENST00000613788 LRRC30A6NM36 301 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 IL1AP01583 271 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 CD37P11049 281 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 IRF2P14316 349 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 DAOP14920 347 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 MPZP25189 248 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 SERPINB10P48595 397 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 MXD1Q05195 221 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 IL24Q13007 206 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 PDZK1IP1Q13113 114 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 RIN1Q13671 783 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 ZNF181Q2M3W8 571 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 CALHM1Q8IU99 346 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 C11orf53Q8IXP5 236 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 ZSCAN4Q8NAM6 433 aaPredicted RBP12.42□□□□□ -0.42
CD48-203ENST00000613788 Q8TCH9 128 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 RFT1Q96AA3 541 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 ISOC1Q96CN7 298 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 S100A13Q99584 98 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 FBN2P35556 2912 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 hCG_1807616A0A1W2PRN6 198 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 ZNF701M0R085 212 aaPredicted RBP12.42□□□□□ -0.42
CD48-203ENST00000613788 CDC14BO60729 498 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 NDUFS7O75251 213 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 ACAA1P09110 424 aaPredicted RBP12.42□□□□□ -0.42
CD48-203ENST00000613788 TMEM225BP0DP42 221 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 TGFBR1P36897 503 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 CFHR2P36980 270 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 PTGFRP43088 359 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 PTH2RP49190 550 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 POU3F4P49335 361 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 ATP5J2P56134 94 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 C1orf100Q5SVJ3 147 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 SLC25A26Q70HW3 274 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 RNF144BQ7Z419 303 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 CROCCP3Q8IVE0 287 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 SAXO1Q8IYX7 474 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 C1orf87Q8N0U7 546 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 OR10Z1Q8NGY1 313 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 TNFAIP8L1Q8WVP5 186 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 CCL17Q92583 94 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 GSX2Q9BZM3 304 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 RBM38Q9H0Z9 239 aaKnown RBP12.42□□□□□ -0.42
CD48-203ENST00000613788 CNTD2Q9H8S5 307 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 PLGRKTQ9HBL7 147 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 MYOZ1Q9NP98 299 aaPredicted RBP12.42□□□□□ -0.42
CD48-203ENST00000613788 RNF7Q9UBF6 113 aa12.42□□□□□ -0.42
CD48-203ENST00000613788 RSL24D1Q9UHA3 163 aaKnown RBP12.42□□□□□ -0.42
CD48-203ENST00000613788 NOTOA8MTQ0 251 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms