RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 H3BSH0 61 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 TBX1O43435 398 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 SC5DO75845 299 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 GATBO75879 557 aaKnown RBP9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 IGHV2-5P01817 119 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 LCATP04180 440 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 ISG15P05161 165 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 CELA3BP08861 270 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 ANOS1P23352 680 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 OMGP23515 440 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 STOMP27105 288 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 ALDH3B1P43353 468 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 SOX2P48431 317 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 SERPINB10P48595 397 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZMAT1Q5H9K5 638 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 C16orf87Q6PH81 154 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF584Q8IVC4 421 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR8B12Q8NGG6 310 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR4F5Q8NH21 305 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 GPR148Q8TDV2 347 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 POM121L2Q96KW2 1035 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 KCTD7Q96MP8 289 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 DCUN1D5Q9BTE7 237 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 DCSTAMPQ9H295 470 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 PPIL3Q9H2H8 161 aaKnown RBP9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 SP140LQ9H930 580 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF69Q9UC07 566 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 PPIAL4EA0A075B759 164 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 PPIAL4CA0A0B4J2A2 164 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 C5orf49A4QMS7 147 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 PPIAL4DF5H284 164 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 CDRT1O95170 752 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 UCHL1P09936 223 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 UBCP0CG48 685 aaKnown RBP9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 PPIAL4FP0DN26 164 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 CCL2P13500 99 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF182P17025 639 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 CCNOP22674 350 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 APLNRP35414 380 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 RAD52P43351 418 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 RPS23P62266 143 aaKnown RBP9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 Q499Y3 187 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 AVPI1Q5T686 147 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 FAM27D1Q5T7N8 215 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 REC114Q7Z4M0 266 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 MYPOPQ86VE0 399 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 KIR3DL3Q8N743 410 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR51A4Q8NGJ6 313 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR51E1Q8TCB6 317 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 PHYHIPQ92561 330 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 SGK3Q96BR1 496 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR14A2Q96R54 314 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 SYT3Q9BQG1 590 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR10A2Q9H208 303 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 NOX4Q9NPH5 578 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 GPR84Q9NQS5 396 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 HHLA2Q9UM44 414 aa9.52□□□□□ -0.89
TRAPPC4-213ENST00000533149 TRBV5-7A0A0A0MS05 114 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 A0A1B0GVI7 797 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 LOC107986453A0A1B0GWG9 222 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 ANKRD61A6NGH8 418 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 SYT7O43581 403 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 NCR1O76036 304 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 CLEC2LP0C7M8 214 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 OCM2P0CE71 109 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF14P17017 642 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 SDC2P34741 201 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 GLRXP35754 106 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 RPS19P39019 145 aaKnown RBP9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 SNAI3Q3KNW1 292 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 OLFML2AQ68BL7 652 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 Q6ZPA2 131 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 COLCA1Q6ZS62 124 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 BCL6BQ8N143 479 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 SLC30A7Q8NEW0 376 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR52H1Q8NGJ2 320 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR1J2Q8NGS2 313 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 DYNC2LI1Q8TCX1 351 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 TSEN15Q8WW01 171 aaKnown RBP9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 TIMD4Q96H15 378 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 FAM71F1Q96KD3 344 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 LYZL4Q96KX0 146 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF48Q96MX3 618 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 DERL3Q96Q80 235 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 SNTG1Q9NSN8 517 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 DHDHQ9UQ10 334 aa9.51□□□□□ -0.89
TRAPPC4-213ENST00000533149 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 TRAV1-2A0A0B4J238 106 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 A0A0U1RQV5 110 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 SHISA3A0PJX4 238 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 CDC14BO60729 498 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 ARL6IP5O75915 188 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 IGLV3-1P01715 115 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 CRYBA1P05813 215 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 NAT2P11245 290 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 MAPK3P27361 379 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 CALRP27797 417 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 MTNR1BP49286 362 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 LCN2P80188 198 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms