RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 C12orf54Q6X4T0 127 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 LY6G5BQ8NDX9 201 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 CCDC54Q8NEL0 328 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 GCDHQ92947 438 aaPredicted RBP27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 MED30Q96HR3 178 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 TBX15Q96SF7 602 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 PCGF1Q9BSM1 259 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 C9orf16Q9BUW7 83 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 PRDM13Q9H4Q3 707 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 NLKQ9UBE8 527 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4Q9UBX2 424 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 SLC22A13Q9Y226 551 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DNAJC9-AS1A6NH13 148 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 RHBDL1O75783 438 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 RPP14O95059 124 aaKnown RBP27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 SFTPBP07988 381 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 ISL1P61371 349 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 BAMBIQ13145 260 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 PDCD1Q15116 288 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 OCLNQ16625 522 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 RORBQ92753 470 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 UBE2FQ969M7 185 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 C1orf147Q96MC9 270 aaPredicted RBP27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 CNTD2Q9H8S5 307 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 S100A14Q9HCY8 104 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 KPTNQ9Y664 436 aa27.31■■□□□ 1.96
SSSCA1-205ENST00000527920 ENTPD6O75354 484 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 GLRA1P23415 457 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 ACTC1P68032 377 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 ACTA1P68133 377 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 IL13RA1P78552 427 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 HAGHLQ6PII5 290 aaPredicted RBP27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 ZNF573Q86YE8 665 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 OR5T2Q8NGG2 359 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 SNTG1Q9NSN8 517 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 RASL12Q9NYN1 266 aa27.3■■□□□ 1.96
SSSCA1-205ENST00000527920 OR2AT4A6NND4 320 aa27.29■■□□□ 1.96
SSSCA1-205ENST00000527920 SIGLEC5O15389 551 aa27.29■■□□□ 1.96
SSSCA1-205ENST00000527920 GMFBP60983 142 aa27.29■■□□□ 1.96
SSSCA1-205ENST00000527920 C8orf46Q8TAG6 207 aa27.29■■□□□ 1.96
SSSCA1-205ENST00000527920 TMIGD2Q96BF3 282 aa27.29■■□□□ 1.96
SSSCA1-205ENST00000527920 GAFA1Q96PS6 74 aa27.29■■□□□ 1.96
SSSCA1-205ENST00000527920 PQLC2LA1A4F0 135 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 SNTNA6NMZ2 147 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 J3QT63 122 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 ZNF85Q03923 595 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 IKZF1Q13422 519 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 ZIK1Q3SY52 487 aaPredicted RBP27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 CDONQ4KMG0 1287 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 FAM220AQ7Z4H9 259 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 PQLC1Q8N2U9 271 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 KIR3DL3Q8N743 410 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 POC1AQ8NBT0 407 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 MBOAT4Q96T53 435 aa27.28■■□□□ 1.96
SSSCA1-205ENST00000527920 A0A1B0GVI7 797 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 J3QRE1 110 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 RNASE1P07998 156 aaKnown RBP27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 ACAA1P09110 424 aaPredicted RBP27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 CAV3P56539 151 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 DMRTC1Q5HYR2 192 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 BRD3OSQ6XYD6 125 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 KCTD20Q7Z5Y7 419 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 FGFRL1Q8N441 504 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 RNFT2Q96EX2 444 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 DCTN5Q9BTE1 182 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 ZNF222Q9UK12 451 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 POLDIP2Q9Y2S7 368 aa27.27■■□□□ 1.96
SSSCA1-205ENST00000527920 CENPVL3A0A0U1RRI6 287 aa27.26■■□□□ 1.95
SSSCA1-205ENST00000527920 NOS1APO75052 506 aaPredicted RBP27.26■■□□□ 1.95
SSSCA1-205ENST00000527920 ARF6P62330 175 aa27.26■■□□□ 1.95
SSSCA1-205ENST00000527920 SLC25A28Q96A46 364 aa27.26■■□□□ 1.95
SSSCA1-205ENST00000527920 PLEKHA1Q9HB21 404 aa27.26■■□□□ 1.95
SSSCA1-205ENST00000527920 GPR173Q9NS66 373 aa27.26■■□□□ 1.95
SSSCA1-205ENST00000527920 PCDHGB1Q9Y5G3 927 aa27.26■■□□□ 1.95
SSSCA1-205ENST00000527920 TENM1Q9UKZ4 2725 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 IGKV1D-17A0A075B6S4 117 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 SYT7O43581 403 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 UBCP0CG48 685 aaKnown RBP27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 PSG2P11465 335 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 HAAOP46952 286 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 DGUOKQ16854 277 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 SMIM21Q3B7S5 101 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 CMTM4Q8IZR5 234 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 GATAD2BQ8WXI9 593 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 C10orf35Q96D05 121 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 NOX4Q9NPH5 578 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 ACOXLQ9NUZ1 547 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 SLC25A10Q9UBX3 287 aaPredicted RBP27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 GNG8Q9UK08 70 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 GMPPBQ9Y5P6 360 aa27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 SOX21Q9Y651 276 aaPredicted RBP27.25■■□□□ 1.95
SSSCA1-205ENST00000527920 ANKRD61A6NGH8 418 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 HAX1O00165 279 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 MPZL2O60487 215 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 PGA5P0DJD9 388 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 SELLP14151 372 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 GABRB1P18505 474 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 MPZP25189 248 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 SLC9A3R2Q15599 337 aa27.24■■□□□ 1.95
SSSCA1-205ENST00000527920 ZBTB49Q6ZSB9 765 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms