RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 IRF2P14316 349 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 BDH1Q02338 343 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 SPHARQ15513 63 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 UBE2V2Q15819 145 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 SYT6Q5T7P8 510 aaPredicted RBP10.87□□□□□ -0.67
SMPD1-202ENST00000526280 ZNF826PQ6ZT77 177 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 C1orf87Q8N0U7 546 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 ZFP41Q8N8Y5 198 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 PP6455Q8WZ26 134 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 RGP1Q92546 391 aaPredicted RBP10.87□□□□□ -0.67
SMPD1-202ENST00000526280 GHSRQ92847 366 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 YIPF6Q96EC8 236 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 OR5M11Q96RB7 305 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 BCL7BQ9BQE9 202 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 FUNDC2Q9BWH2 189 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 OR51I2Q9H344 312 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 ACOT13Q9NPJ3 140 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 RNF7Q9UBF6 113 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 ZNF281Q9Y2X9 895 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 ABCA1O95477 2261 aa10.87□□□□□ -0.67
SMPD1-202ENST00000526280 PQLC2LA1A4F0 135 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 LRP5LA4QPB2 252 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 CDIPTO14735 213 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 GATBO75879 557 aaKnown RBP10.86□□□□□ -0.67
SMPD1-202ENST00000526280 FSTL3O95633 263 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 LHBP01229 141 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 CD1AP06126 327 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 ZNF20P17024 532 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 CFHR2P36980 270 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 BTG1P62324 171 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 ZMYND11Q15326 602 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 WDR82Q6UXN9 313 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 SLC16A12Q6ZSM3 486 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 UTS2BQ765I0 119 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 LRRC28Q86X40 367 aaPredicted RBP10.86□□□□□ -0.67
SMPD1-202ENST00000526280 PARP16Q8N5Y8 322 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 SCCPDHQ8NBX0 429 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 CLDND2Q8NHS1 167 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 GPR148Q8TDV2 347 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 RPL3LQ92901 407 aaKnown RBP10.86□□□□□ -0.67
SMPD1-202ENST00000526280 PGLYRP3Q96LB9 341 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 TECTBQ96PL2 329 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 DHDHQ9UQ10 334 aa10.86□□□□□ -0.67
SMPD1-202ENST00000526280 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 hCG_1807616A0A1W2PRN6 198 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 PPIAL4DF5H284 164 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 ATF1P18846 271 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 CELP19835 753 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 PSMB9P28065 219 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 FUT6P51993 359 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 LMO4P61968 165 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 RPS11P62280 158 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMPD1-202ENST00000526280 MED22Q15528 200 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 TMEM249Q2WGJ8 235 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 TMEM155Q4W5P6 130 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 YIF1BQ5BJH7 314 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 FAM201AQ5SY85 155 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 UBE2UQ5VVX9 321 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 SERPINA12Q8IW75 414 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 GCSAMQ8N6F7 178 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 OR5D14Q8NGL3 314 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 TSEN15Q8WW01 171 aaKnown RBP10.85□□□□□ -0.67
SMPD1-202ENST00000526280 NARFLQ9H6Q4 476 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 METTL17Q9H7H0 456 aaPredicted RBP10.85□□□□□ -0.67
SMPD1-202ENST00000526280 TMEM165Q9HC07 324 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 SLC7A11Q9UPY5 501 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 PPIAL4AQ9Y536 164 aa10.85□□□□□ -0.67
SMPD1-202ENST00000526280 IGKV1-9A0A0C4DH69 117 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 TRBV5-5A0A0J9YX44 114 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 PNMA8CA0A1B0GUJ8 204 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 ISPDA4D126 451 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 ZNF205O95201 554 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 OCM2P0CE71 109 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 IL2RGP31785 369 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 MDH2P40926 338 aaKnown RBP10.84□□□□□ -0.67
SMPD1-202ENST00000526280 SOX2P48431 317 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 HOXA4Q00056 320 aaPredicted RBP10.84□□□□□ -0.67
SMPD1-202ENST00000526280 GPR50Q13585 617 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 CNN3Q15417 329 aaKnown RBP10.84□□□□□ -0.67
SMPD1-202ENST00000526280 TBCEQ15813 527 aaPredicted RBP10.84□□□□□ -0.67
SMPD1-202ENST00000526280 CTF1Q16619 201 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 BIVMQ86UB2 503 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 ZNF573Q86YE8 665 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 DNAAF1Q8NEP3 725 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 OR13C5Q8NGS8 318 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 OR10Z1Q8NGY1 313 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 TBC1D15Q8TC07 691 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 LRRC29Q8WV35 223 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 AQP3Q92482 292 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 C1orf159Q96HA4 380 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 SMR3AQ99954 134 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 ZCCHC4Q9H5U6 513 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 PLGRKTQ9HBL7 147 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 ISYNA1Q9NPH2 558 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 IGKV1-27A0A075B6S5 117 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 FAM230AA0A1W2PPH8 454 aa10.84□□□□□ -0.67
SMPD1-202ENST00000526280 LGALS8O00214 317 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms