RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LILRB1Q8NHL6 650 aaPredicted RBP16.07■□□□□ 0.16
SDC2-202ENST00000518385 RELTQ969Z4 430 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 FOXN4Q96NZ1 517 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 KCNK15Q9H427 330 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.07■□□□□ 0.16
SDC2-202ENST00000518385 CYTL1Q9NRR1 136 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 BOKQ9UMX3 212 aaPredicted RBP16.07■□□□□ 0.16
SDC2-202ENST00000518385 EML6Q6ZMW3 1958 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 TMEM269A0A1B0GVZ9 245 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 FAM25EA8MYX2 175 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 CCSO14618 274 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 MPZL1O95297 269 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 OPN1LWP04000 364 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 H2BFMP0C1H6 154 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 ITGA3P26006 1051 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 B3GALT5-AS1P59052 145 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 RAB5BP61020 215 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 SPOCK1Q08629 439 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 SRSF6Q13247 344 aaKnown RBP16.06■□□□□ 0.16
SDC2-202ENST00000518385 PPA1Q15181 289 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 RNF212Q495C1 297 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 ATP1A1-AS1Q5TC04 95 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 PEG10Q86TG7 708 aaKnown RBP16.06■□□□□ 0.16
SDC2-202ENST00000518385 CD163Q86VB7 1156 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 PAQR4Q8N4S7 273 aaPredicted RBP16.06■□□□□ 0.16
SDC2-202ENST00000518385 C15orf54Q8N8G6 183 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 NUDCD2Q8WVJ2 157 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 C12orf57Q99622 126 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 TCEAL7Q9BRU2 100 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 GPR132Q9UNW8 380 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 EMC9Q9Y3B6 208 aa16.06■□□□□ 0.16
SDC2-202ENST00000518385 IGKV1D-43A0A0B4J1Z2 117 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 ZNF814B7Z6K7 855 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 NKX2-8O15522 239 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 CA11O75493 328 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 FAM157CP0CG43 387 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 VAMP1P23763 118 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 MEOX2P50222 304 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 SOX8P57073 446 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 MOGAT2Q3SYC2 334 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 WDFY1Q8IWB7 410 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 ACBD4Q8NC06 268 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 CHST4Q8NCG5 386 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 OR4D6Q8NGJ1 314 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 OR4K15Q8NH41 348 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 KCNG3Q8TAE7 436 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 MRGPRFQ96AM1 343 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 C2orf50Q96LR7 162 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 OCSTAMPQ9BR26 566 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 RNF126Q9BV68 326 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 TREM1Q9NP99 234 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 SMCO4Q9NRQ5 59 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 ASH2LQ9UBL3 628 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 GHRLQ9UBU3 117 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 WASF3Q9UPY6 502 aa16.05■□□□□ 0.16
SDC2-202ENST00000518385 EEF1E1-BLOC1S5C9J1V9 151 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 NPIPA2E9PIF3 369 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 NPIPA3F8WFD2 350 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 G3V3Y1 287 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 MFNGO00587 321 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 GAPDHP04406 335 aaKnown RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 ADCYAP1P18509 176 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 WT1P19544 449 aaPredicted RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 HRH1P35367 487 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 SUCLG1P53597 346 aaKnown RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 RRADP55042 308 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 TAS2R46P59540 309 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 LSM6P62312 80 aaKnown RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 ATXN7L3Q14CW9 347 aaPredicted RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 C10orf128Q5T292 105 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 KCTD9Q7L273 389 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 OR51A2Q8NGJ7 313 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 OR2AJ1Q8NGZ0 328 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 OR14L1PQ8NHC6 308 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 TMEM54Q969K7 222 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 FAM173AQ9BQD7 235 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 NRIP2Q9BQI9 281 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 EGLN1Q9GZT9 426 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 CNTD2Q9H8S5 307 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 LRFN1Q9P244 771 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 RCC2Q9P258 522 aaKnown RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 FLVCR1Q9Y5Y0 555 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 ALPK2Q86TB3 2170 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 A0A0J9YW62 118 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 LRRC3CA6NJW4 275 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 ACTL6AO96019 429 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 SMIM6P0DI80 62 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 GUCA1AP43080 201 aaPredicted RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 CLDN17P56750 224 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 SGCAQ16586 387 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 LURAP1LQ8IV03 231 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 OR4S1Q8NGB4 309 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 OR9K2Q8NGE7 335 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 SLAMF6Q96DU3 332 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 SCNM1Q9BWG6 230 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 TUBA4BQ9H853 241 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 PARP11Q9NR21 331 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 MYEF2Q9P2K5 600 aaKnown RBP16.04■□□□□ 0.16
SDC2-202ENST00000518385 KPTNQ9Y664 436 aa16.04■□□□□ 0.16
SDC2-202ENST00000518385 FREM3P0C091 2139 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms