RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 AGPAT2O15120 278 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 FCMRO60667 390 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ECI2O75521 394 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 GLSO94925 669 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 IFNA5P01569 189 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 CSTBP04080 98 aaKnown RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PGA4P0DJD7 388 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PGA5P0DJD9 388 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 HOXB2P14652 356 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 S100A7P31151 101 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 GABRA3P34903 492 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR1D2P34982 312 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 P2RY2P41231 377 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 VIPR2P41587 438 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 GUCA1AP43080 201 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 LPAR6P43657 344 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAB9AP51151 201 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ATP1B3P54709 279 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR12D2P58182 307 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TAS2R20P59543 309 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SNRPD1P62314 119 aaKnown RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 YPEL5P62699 121 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TLE3Q04726 772 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 DHRS2Q13268 280 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAB30Q15771 203 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PMCHL1Q16048 86 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 POU2AF1Q16633 256 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC25A52Q3SY17 297 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SPIN3Q5JUX0 258 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 CTSL3PQ5NE16 218 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TPTE2P1Q5T6R2 138 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPR157Q5UAW9 335 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SYPL2Q5VXT5 272 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 KCNIP4Q6PIL6 250 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 DPPA3Q6W0C5 159 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 C12orf54Q6X4T0 127 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF66Q6ZN08 573 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 RPS27LQ71UM5 84 aaKnown RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 CHST9Q7L1S5 443 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PRSS45Q7RTY3 260 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 S100A7AQ86SG5 101 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC25A42Q86VD7 318 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM173Q86WV6 379 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF280BQ86YH2 543 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF101Q8IZC7 436 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 CMTM8Q8IZV2 173 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PAQR4Q8N4S7 273 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR52E1Q8NGJ3 308 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR52B4Q8NGK2 314 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR2Y1Q8NGV0 311 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR2T27Q8NH04 317 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4X1Q8NH49 305 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM239Q8WW34 195 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 DNASE2BQ8WZ79 361 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 APH1AQ96BI3 265 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SEH1LQ96EE3 360 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ALG14Q96F25 216 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 LMLNQ96KR4 655 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PRAP1Q96NZ9 151 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 AP1S3Q96PC3 154 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF607Q96SK3 696 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 GABRG3Q99928 467 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PYGO2Q9BRQ0 406 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 C20orf24Q9BUV8 137 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 FNDC11Q9BVV2 318 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAB1BQ9H0U4 201 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 AUNIPQ9H7T9 357 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 METTL7AQ9H8H3 244 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TM7SF3Q9NS93 570 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 SPANXCQ9NY87 97 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR6C3Q9NZP0 311 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 KIAA1456Q9P272 454 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ABI3Q9P2A4 366 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 GALPQ9UBC7 116 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 KLK11Q9UBX7 282 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TRAPPC2LQ9UL33 140 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRPS33Q9Y291 106 aaKnown RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 YARS2Q9Y2Z4 477 aaKnown RBP4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 TNFRSF18Q9Y5U5 241 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 PTGDR2Q9Y5Y4 395 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 V9GY05 133 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 ITGB4P16144 1822 aa4.25□□□□□ -1.73
HMGB1P19-201ENST00000517578 NRXN3Q9Y4C0 1643 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 PDCD11Q14690 1871 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 TRIP11Q15643 1979 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 TRAV26-1A0A087WT03 109 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 TISP43B9A030 160 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 H7BYZ3 331 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 SIRPB1O00241 398 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPR32O75388 356 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 TSPAN13O95857 204 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ABHD16AO95870 558 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 CH25HO95992 272 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 CYB5AP00167 134 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 HLA-AP01891 365 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 MBPP02686 304 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 PRH1P02810 166 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 REG1AP05451 166 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 CXCL1P09341 107 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 HNRNPA1P09651 372 aaKnown RBP eCLIP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms