RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 DDI2Q5TDH0 399 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 OR52N4Q8NGI2 321 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 FN3KRPQ9HA64 309 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 BARX1Q9HBU1 254 aaPredicted RBP17.75■□□□□ 0.43
LSM6-207ENST00000515311 GCM1Q9NP62 436 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 PPP1R3CQ9UQK1 317 aa17.75■□□□□ 0.43
LSM6-207ENST00000515311 IGKV1-27A0A075B6S5 117 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 TRIM64BA6NI03 449 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 IFNL4K9M1U5 179 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 MAS1P04201 325 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 ADRA2CP18825 462 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 PTH2RP49190 550 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 MPPED2Q15777 294 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 PRAMEF6Q5VXH4 476 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 SCCPDHQ8NBX0 429 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 Q8TCH9 128 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 BCL7BQ9BQE9 202 aa17.74■□□□□ 0.43
LSM6-207ENST00000515311 FLNBO75369 2602 aaKnown RBP17.73■□□□□ 0.43
LSM6-207ENST00000515311 DYSFO75923 2080 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 IGHV1-69-2A0A0G2JMI3 117 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 J3QT63 122 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 NDUFS7O75251 213 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 IGHV4-39P01824 125 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 MPZP25189 248 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 HAAOP46952 286 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 TMBIM6P55061 237 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 CTF1Q16619 201 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 ZNF181Q2M3W8 571 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 CRIP3Q6Q6R5 217 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 CDH24Q86UP0 819 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 MOGAT3Q86VF5 341 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 TPRA1Q86W33 373 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 CLVS1Q8IUQ0 354 aaPredicted RBP17.73■□□□□ 0.43
LSM6-207ENST00000515311 RAB2BQ8WUD1 216 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 RDH5Q92781 318 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 PKIBQ9C010 78 aa17.73■□□□□ 0.43
LSM6-207ENST00000515311 NAA50Q9GZZ1 169 aaKnown RBP17.73■□□□□ 0.43
LSM6-207ENST00000515311 METTL17Q9H7H0 456 aaPredicted RBP17.73■□□□□ 0.43
LSM6-207ENST00000515311 IGHV3-64DA0A0J9YX35 117 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 SHISA3A0PJX4 238 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 A6NLC8 198 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 PDCD5O14737 125 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 CD37P11049 281 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 DAOP14920 347 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 ZNF93P35789 620 aaPredicted RBP17.72■□□□□ 0.43
LSM6-207ENST00000515311 CFHR2P36980 270 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 PSMD7P51665 324 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 ATP5J2P56134 94 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 DEFB113Q30KQ7 82 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 HAGHLQ6PII5 290 aaPredicted RBP17.72■□□□□ 0.43
LSM6-207ENST00000515311 LYPD6Q86Y78 171 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 CALHM1Q8IU99 346 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 C11orf53Q8IXP5 236 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 LRRC75A-AS1Q8N1F1 130 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 OR11L1Q8NGX0 322 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 AQP3Q92482 292 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 HPS1Q92902 700 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 FOXRED1Q96CU9 486 aaPredicted RBP17.72■□□□□ 0.43
LSM6-207ENST00000515311 SPACA5Q96QH8 159 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 UQCC2Q9BRT2 126 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 RNF167Q9H6Y7 350 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 MYOZ1Q9NP98 299 aaPredicted RBP17.72■□□□□ 0.43
LSM6-207ENST00000515311 DLL4Q9NR61 685 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 UFSP2Q9NUQ7 469 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 POLDIP2Q9Y2S7 368 aa17.72■□□□□ 0.43
LSM6-207ENST00000515311 PDZD2O15018 2839 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 LRRC30A6NM36 301 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 LSM3P62310 102 aaKnown RBP17.71■□□□□ 0.43
LSM6-207ENST00000515311 IL24Q13007 206 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 HFEQ30201 348 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 GLT8D1Q68CQ7 371 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 WDR82Q6UXN9 313 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 ANGPTL5Q86XS5 388 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 PNLDC1Q8NA58 520 aaKnown RBP17.71■□□□□ 0.43
LSM6-207ENST00000515311 ZNF420Q8TAQ5 688 aaPredicted RBP17.71■□□□□ 0.43
LSM6-207ENST00000515311 GPER1Q99527 375 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 C1orf123Q9NWV4 160 aa17.71■□□□□ 0.43
LSM6-207ENST00000515311 CDIPTO14735 213 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 CDC14BO60729 498 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 RP2O75695 350 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 LY6HO94772 140 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 ACAA1P09110 424 aaPredicted RBP17.7■□□□□ 0.42
LSM6-207ENST00000515311 RAB3BP20337 219 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 SDC2P34741 201 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 PMELP40967 661 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 ZP1P60852 638 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 NCS1P62166 190 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 PDZK1IP1Q13113 114 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 RNF144BQ7Z419 303 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 SAXO1Q8IYX7 474 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 JAGN1Q8N5M9 183 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 ZSCAN4Q8NAM6 433 aaPredicted RBP17.7■□□□□ 0.42
LSM6-207ENST00000515311 OR10Z1Q8NGY1 313 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 RFT1Q96AA3 541 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 PERPQ96FX8 193 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 GFI1Q99684 422 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 AK6Q9Y3D8 172 aaKnown RBP17.7■□□□□ 0.42
LSM6-207ENST00000515311 CEPT1Q9Y6K0 416 aa17.7■□□□□ 0.42
LSM6-207ENST00000515311 ARID1AO14497 2285 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 NOL3O60936 208 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms