RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EXOSC4Q9NPD3 245 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-220ENST00000514830 CEPT1Q9Y6K0 416 aa10.15□□□□□ -0.78
PDLIM5-220ENST00000514830 MED13LQ71F56 2210 aa10.15□□□□□ -0.78
PDLIM5-220ENST00000514830 ITPR3Q14573 2671 aa10.15□□□□□ -0.78
PDLIM5-220ENST00000514830 PDZD2O15018 2839 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 LOC100506127A0A0U1RQW1 187 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 A0A1W2PPK0 400 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 SHISA3A0PJX4 238 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 ZNF732B4DXR9 585 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 PDCD5O14737 125 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 SLC22A1O15245 554 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 MAGEB3O15480 346 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 SPRY3O43610 288 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 IL1AP01583 271 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 RANBP1P43487 201 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 GPM6AP51674 278 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 KRTAP10-9P60411 292 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 ZNF154Q13106 437 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 RIN1Q13671 783 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 KISS1Q15726 138 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 C1orf100Q5SVJ3 147 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 WDR86Q86TI4 376 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 CLVS1Q8IUQ0 354 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 SAXO1Q8IYX7 474 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 ZSCAN4Q8NAM6 433 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 ORAI1Q96D31 301 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 BORCS8Q96FH0 119 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 OR2V2Q96R30 315 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 GSX2Q9BZM3 304 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 NAA50Q9GZZ1 169 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 BATF3Q9NR55 127 aa10.14□□□□□ -0.79
PDLIM5-220ENST00000514830 IGKV1-27A0A075B6S5 117 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 J3QT63 122 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 NOS1APO75052 506 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 NCR1O76036 304 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 FSTL3O95633 263 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 F12P00748 615 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 HCKP08631 526 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 EFNA4P52798 201 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 IL24Q13007 206 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 DDI2Q5TDH0 399 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 GLT8D1Q68CQ7 371 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 FAM166AQ6J272 317 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 ASCL4Q6XD76 172 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 C11orf53Q8IXP5 236 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 LRRC75A-AS1Q8N1F1 130 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 ZCCHC24Q8N2G6 241 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 OR52N4Q8NGI2 321 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 OR10Z1Q8NGY1 313 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 ITLN1Q8WWA0 313 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 DVL3Q92997 716 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 ISOC1Q96CN7 298 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 SORCS2Q96PQ0 1159 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 VRK1Q99986 396 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 FN3KRPQ9HA64 309 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 SAP30LQ9HAJ7 183 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 RHOFQ9HBH0 211 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 GCM1Q9NP62 436 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 MYOZ1Q9NP98 299 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 DECR2Q9NUI1 292 aa10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 BEX4Q9NWD9 120 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-220ENST00000514830 OTOGQ6ZRI0 2925 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 FAM230AA0A1W2PPH8 454 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 MAS1P04201 325 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 OCMP0CE72 109 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 RAB3BP20337 219 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 SDC2P34741 201 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 ZNF93P35789 620 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 MTCP1P56278 107 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 ZP1P60852 638 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 CCL8P80075 99 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 PDZK1IP1Q13113 114 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 USP43Q70EL4 1123 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 CROCCP3Q8IVE0 287 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 SCCPDHQ8NBX0 429 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 Q8NFD4 153 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 PXT1Q8NFP0 134 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 AQP3Q92482 292 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 HPS1Q92902 700 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 GFI1Q99684 422 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 TPK1Q9H3S4 243 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 LIME1Q9H400 295 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 BARX1Q9HBU1 254 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 DLL4Q9NR61 685 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 IL36GQ9NZH8 169 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 POLDIP2Q9Y2S7 368 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 V9GY05 133 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 USF3Q68DE3 2245 aa10.12□□□□□ -0.79
PDLIM5-220ENST00000514830 ARID1AO14497 2285 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 A0A0G2JK05 382 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 IGHV1-69-2A0A0G2JMI3 117 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 DPPA5A6NC42 116 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 A6NHS1 94 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 NOTOA8MTQ0 251 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 H3BMQ9 156 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 SLC17A2O00624 439 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 NOL3O60936 208 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 HPXP02790 462 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 CDKN1AP38936 164 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms