RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 DHRS1Q96LJ7 313 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 TSSK2Q96PF2 358 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 GPX7Q96SL4 187 aaPredicted RBP9.29□□□□□ -0.92
RNF4-216ENST00000511859 TLNRD1Q9H1K6 362 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 SRA1Q9HD15 236 aaKnown RBP9.29□□□□□ -0.92
RNF4-216ENST00000511859 ARMC1Q9NVT9 282 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 DNAJB9Q9UBS3 223 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 NKX1-2Q9UD57 310 aaPredicted RBP9.29□□□□□ -0.92
RNF4-216ENST00000511859 B9D1Q9UPM9 204 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 LRP12Q9Y561 859 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 SORL1Q92673 2214 aa9.29□□□□□ -0.92
RNF4-216ENST00000511859 IGLV1-36A0A0B4J1U3 117 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 RHBDL1O75783 438 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 BAG2O95816 211 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 TXNDC12O95881 172 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 LYL1P12980 280 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 PRKACGP22612 351 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 FASP25445 335 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 OTX1P32242 354 aaPredicted RBP9.28□□□□□ -0.92
RNF4-216ENST00000511859 DYNLT3P51808 116 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 RPS6KA3P51812 740 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 CSNK2BP67870 215 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 TMEM95Q3KNT9 176 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 DPY19L2P2Q6ZN68 376 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 MRPL41Q8IXM3 137 aaKnown RBP9.28□□□□□ -0.92
RNF4-216ENST00000511859 OR6V1Q8N148 313 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 LNX2Q8N448 690 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 OR9Q2Q8NGE9 314 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 OR51D1Q8NGF3 324 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 OR4C15Q8NGM1 316 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 FUZQ9BT04 418 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 ANKRD19PQ9H560 264 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 S100A14Q9HCY8 104 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 SNTG1Q9NSN8 517 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 TBL2Q9Y4P3 447 aaKnown RBP9.28□□□□□ -0.92
RNF4-216ENST00000511859 IER3IP1Q9Y5U9 82 aa9.28□□□□□ -0.92
RNF4-216ENST00000511859 SAC3D1A6NKF1 404 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 H0YHG0 523 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 XRCC2O43543 280 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 CCNB2O95067 398 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 CCDC159P0C7I6 412 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 ATP6AP1Q15904 470 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 ZFP1Q6P2D0 407 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 LHFPL4Q7Z7J7 247 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 FAM185AQ8N0U4 392 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 C11orf42Q8N5U0 333 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 SPSB4Q96A44 273 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 FOXRED1Q96CU9 486 aaPredicted RBP9.27□□□□□ -0.93
RNF4-216ENST00000511859 WDR13Q9H1Z4 485 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 PALMDQ9NP74 551 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 GAR1Q9NY12 217 aaKnown RBP9.27□□□□□ -0.93
RNF4-216ENST00000511859 KCNG2Q9UJ96 466 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 SIGLEC7Q9Y286 467 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 TMEM5Q9Y2B1 443 aa9.27□□□□□ -0.93
RNF4-216ENST00000511859 OR2AT4A6NND4 320 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 HOXB6P17509 224 aaKnown RBP9.26□□□□□ -0.93
RNF4-216ENST00000511859 AZGP1P25311 298 aaKnown RBP9.26□□□□□ -0.93
RNF4-216ENST00000511859 NOS3P29474 1203 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 GNALP38405 381 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 GABRA2P47869 451 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 HMGA2P52926 109 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 SLC25A1P53007 311 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 ERVFRD-1P60508 538 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 IL5RAQ01344 420 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 RCN1Q15293 331 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 SSX2Q16385 188 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 PLA1AQ53H76 456 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 ZBTB46Q86UZ6 589 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 C10orf67Q8IYJ2 551 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 DYNAPQ8N1N2 210 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 ZNRF1Q8ND25 227 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 OR10G2Q8NGC3 310 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 OR52H1Q8NGJ2 320 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 GIPC3Q8TF64 312 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 ASCL2Q99929 193 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 MICU1Q9BPX6 476 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 NLKQ9UBE8 527 aa9.26□□□□□ -0.93
RNF4-216ENST00000511859 RENP00797 406 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 GASTP01350 101 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 HLA-DQA2P01906 255 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 FCGR1AP12314 374 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 ZNF823P16415 610 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 CHATP28329 748 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 OMPP47874 163 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 THBS3P49746 956 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 GMFBP60983 142 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 FAM3AP98173 230 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 SNCBQ16143 134 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 MICAQ29983 383 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 KHDC1LQ5JSQ8 128 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 MEPCEQ7L2J0 689 aaKnown RBP9.25□□□□□ -0.93
RNF4-216ENST00000511859 CALHM1Q8IU99 346 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 AQP11Q8NBQ7 271 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 TFAP2CQ92754 450 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 ELL3Q9HB65 397 aaPredicted RBP9.25□□□□□ -0.93
RNF4-216ENST00000511859 USE1Q9NZ43 259 aa9.25□□□□□ -0.93
RNF4-216ENST00000511859 RRP15Q9Y3B9 282 aaKnown RBP9.25□□□□□ -0.93
RNF4-216ENST00000511859 UNC119BA6NIH7 251 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 TMEM210A6NLX4 147 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 ANXA2P2A6NMY6 339 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms