RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ABCG2Q9UNQ0 655 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 SAMD4AQ9UPU9 718 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 INSIG2Q9Y5U4 225 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 SLC25A15Q9Y619 301 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 DNAH11Q96DT5 4516 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 MYCBP2O75592 4640 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 DYNC1H1Q14204 4646 aaKnown RBP2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 FAT4Q6V0I7 4981 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 IGLV3-16A0A075B6K0 115 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 TRAV26-1A0A087WT03 109 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 RTL8CO15255 209 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 MBD3O95983 291 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 SERPINA3P01011 423 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 IFNA6P05013 189 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ADRA2AP08913 450 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 H2BFMP0C1H6 154 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 CD28P10747 220 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ANXA8P13928 327 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 COX5AP20674 150 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 NT5EP21589 574 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ZP3P21754 424 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 PAX7P23759 505 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 COL8A2P25067 703 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ATP5A1P25705 553 aaKnown RBP2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 CASP1P29466 404 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 GRIA1P42261 906 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 NDPQ00604 133 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 PRDX1Q06830 199 aaKnown RBP2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 FGL1Q08830 312 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ARHGAP19Q14CB8 494 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 DPYSL2Q16555 572 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 C9orf129Q5T035 196 aaKnown RBP2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 AVPI1Q5T686 147 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF658Q5TYW1 1059 aaPredicted RBP2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ANXA8L1Q5VT79 327 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 RAET1LQ5VY80 246 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 OR8G2PQ6IF36 304 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 TRPM8Q7Z2W7 1104 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 DPY19L4Q7Z388 723 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 SNX20Q7Z614 316 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 CADM2Q8N3J6 435 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ANKFN1Q8N957 763 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 OR9K2Q8NGE7 335 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 OR4C13Q8NGP0 309 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 OR8J1Q8NGP2 316 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 BLOC1S5Q8TDH9 187 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF721Q8TF20 911 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 OSTF1Q92882 214 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 COQ2Q96H96 371 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 RBBP8Q99708 897 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 FAM192AQ9GZU8 254 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF702PQ9H963 129 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 INPP5EQ9NRR6 644 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 VPREB3Q9UKI3 123 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 RPH3ALQ9UNE2 315 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 GSTK1Q9Y2Q3 226 aa2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 CHTOPQ9Y3Y2 248 aaKnown RBP2.48□□□□□ -2.01
TOPBP1-208ENST00000511439 ARPC4-TTLL3A0A0A6YYG9 625 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 CIB4A0PJX0 185 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 NCF1BA6NI72 391 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 NCF1CA8MVU1 366 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 CLDN25C9JDP6 229 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 H3BQV1 296 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 M0R233 179 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 OR7A17O14581 309 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 TNFSF11O14788 317 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 ARPC3O15145 178 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 ZSCAN12O43309 604 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 OR1F1O43749 312 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 FCMRO60667 390 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 RP2O75695 350 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 SERF1AO75920 110 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 IGF1P05019 195 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 FGF4P08620 206 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 TROVE2P10155 538 aaKnown RBP eCLIP2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 PNMTP11086 282 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 BDKRB1P46663 353 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 P2RY4P51582 365 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 LIM2P55344 173 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 LYZP61626 148 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 RGS1Q08116 209 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 STX4Q12846 297 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 CHI3L2Q15782 390 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 ZCWPW2Q504Y3 356 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 PAGE2BQ5JRK9 111 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 PRAMEF5Q5TYX0 476 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 PRAMEF6Q5VXH4 476 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 CARD17Q5XLA6 110 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 LGALS9CQ6DKI2 356 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 PLCZ1Q86YW0 608 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 VSTM4Q8IW00 320 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 CA13Q8N1Q1 262 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 OR10A7Q8NGE5 316 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 AENQ8WTP8 325 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 YIPF5Q969M3 257 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 SLC25A38Q96DW6 304 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 TM4SF19Q96DZ7 209 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 CYYR1Q96J86 154 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 DOK1Q99704 481 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms